SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

PIK3R5,
PIK3R5 Ataxia-oculomotor apraxia 3, 615217 (3)

Genes at Clinical Genomics Database

PIK3R5,
PIK3R5 Ataxia-oculomotor apraxia 3

Genes at HGMD

Summary

Number of Variants: 7
Number of Genes: 1

Export to: CSV
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PIK3R5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sp16_961 17 rs9915880
dbSNP Clinvar
8792003 64.1184 C T PASS 0/1 37 SYNONYMOUS_CODING LOW None 0.20308 0.20310 0.30624 None None None None None None PIK3R5|0.071388323|57.13%
View sp16_961 17 rs381309
dbSNP Clinvar
8792029 388.318 A G PASS 1/1 40 SYNONYMOUS_CODING LOW None 0.44349 0.44350 0.49785 None None None None None None PIK3R5|0.071388323|57.13%
View sp16_961 17 rs16957702
dbSNP Clinvar
8792093 156.085 G A PASS 0/1 60 SYNONYMOUS_CODING LOW None 0.20308 0.20310 0.30724 None None None None None None PIK3R5|0.071388323|57.13%
View sp16_961 17 rs11650737
dbSNP Clinvar
8792171 113.825 T C PASS 0/1 58 SYNONYMOUS_CODING LOW None 0.20308 0.20310 0.30732 None None None None None None PIK3R5|0.071388323|57.13%
View sp16_961 17 rs141354792
dbSNP Clinvar
8791494 48.2423 T C PASS 0/1 25 NON_SYNONYMOUS_CODING MODERATE None 0.00499 0.00499 0.00077 0.31 0.02 None None None None None None PIK3R5|0.071388323|57.13%
View sp16_961 17 rs394811
dbSNP Clinvar
8792514 726.581 G A PASS 1/1 82 SYNONYMOUS_CODING LOW None 0.44269 0.44270 0.49739 None None None None None None PIK3R5|0.071388323|57.13%
View sp16_961 17 rs61753147
dbSNP Clinvar
8809025 116.199 G A PASS 0/1 45 SYNONYMOUS_CODING LOW None 0.02296 0.02296 0.04001 None None None None None None PIK3R5|0.071388323|57.13%
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