SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

BRIP1,
BRIP1 Fanconi anemia, complementation group J, 609054 (3)
{Breast cancer, early-onset, susceptibility to}, 114480 (3)

Genes at Clinical Genomics Database

BRIP1,
BRIP1 Breast cancer
Fanconi anemia, complementation group J

Genes at HGMD

Summary

Number of Variants: 4
Number of Genes: 1

Export to: CSV
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BRIP1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sp16_961 17 rs4986763
dbSNP Clinvar
59760996 1340.1 A G PASS 1/1 138 SYNONYMOUS_CODING LOW None 0.62081 0.62080 0.39396 None None None None None None BRIP1|0.463785702|17.47%
View sp16_961 17 rs45437094
dbSNP Clinvar
59761304 66.0296 G A PASS 0/1 29 NON_SYNONYMOUS_CODING MODERATE None 0.00020 0.00020 0.02 0.23 None None None None None None BRIP1|0.463785702|17.47%
View sp16_961 17 rs4986764
dbSNP Clinvar
59763347 748.284 A G PASS 1/1 78 NON_SYNONYMOUS_CODING MODERATE None 0.62780 0.62780 0.38659 0.94 0.00 None None None None None None BRIP1|0.463785702|17.47%
View sp16_961 17 rs4986765
dbSNP Clinvar
59763465 447.291 T C PASS 1/1 49 SYNONYMOUS_CODING LOW None 0.81510 0.81510 0.26572 None None None None None None BRIP1|0.463785702|17.47%
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