SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 11
Number of Genes: 1

Export to: CSV
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MXRA5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dxc01 snp X rs1635235
dbSNP Clinvar
3228891 759.77 A G PASS 1/1 28 SYNONYMOUS_CODING LOW None 0.61113 0.61110 0.45490 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635242
dbSNP Clinvar
3235724 816.77 C T PASS 1/1 30 NON_SYNONYMOUS_CODING MODERATE None 0.69483 0.69480 0.33589 0.40 0.21 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635245
dbSNP Clinvar
3238167 859.77 T G PASS 1/1 33 SYNONYMOUS_CODING LOW None 0.47073 0.47070 0.48376 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1974522
dbSNP Clinvar
3238733 1054.77 G A PASS 1/1 35 NON_SYNONYMOUS_CODING MODERATE None 0.43152 0.43150 0.47392 0.02 0.98 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1726199
dbSNP Clinvar
3239545 659.77 C T PASS 1/1 21 NON_SYNONYMOUS_CODING MODERATE None 0.72133 0.72130 0.31033 1.00 0.00 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635246
dbSNP Clinvar
3240343 1107.77 G A PASS 1/1 38 NON_SYNONYMOUS_CODING MODERATE None 0.52027 0.52030 0.42384 0.20 0.10 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635247
dbSNP Clinvar
3241050 1127.77 G A PASS 1/1 35 SYNONYMOUS_CODING LOW None 0.52080 0.52080 0.42346 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs5983119
dbSNP Clinvar
3241256 1054.77 T C PASS 1/1 36 NON_SYNONYMOUS_CODING MODERATE None 0.74993 0.74990 0.27114 1.00 0.00 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635248
dbSNP Clinvar
3241284 1127.77 A G PASS 1/1 39 SYNONYMOUS_CODING LOW None 0.46411 0.46410 0.49115 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635249
dbSNP Clinvar
3241317 1083.77 T C PASS 1/1 42 SYNONYMOUS_CODING LOW None 0.75046 0.75050 0.26934 None None None None None None MXRA5|0.002168491|90.52%
View dxc01 snp X rs1635250
dbSNP Clinvar
3241791 1050.77 G A PASS 1/1 36 SYNONYMOUS_CODING LOW None 0.46358 0.46360 0.49143 None None None None None None MXRA5|0.002168491|90.52%
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