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VARIANT EFFECT	FUNCTIONAL CLASS	IMPACT
MUTATION TYPE:	CHR: POS:

DBSNP BUILD: EXCLUDE VARIANTS AT VARISNP	READ DEPTH: QUAL:	VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD SHOW ONLY VARIANTS PRESENT AT HGMD

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1000 GENOMES FREQUENCY	EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES	DBSNP FREQUENCY	EXCLUDE ALL VARIANTS PRESENT IN DBSNP	ESP6500 FREQUENCY	EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

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SIFT SCORE	EXCLUDE VARIANTS WITHOUT SIFT SCORE	POLYPHEN2 SCORE	EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
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+ Genes 16

Genes:
ALMS1, CHL1, FAM230A, GPX1, HLA-B, HLA-C, HLA-DRB1, HLA-DRB5, HMGA1, IVL, KIAA1328, MSH3, NIPA1, PARP8, POU2F1, TTLL8,

+ Genes associated with diseases 8

Genes at Omim

ALMS1, GPX1, HLA-B, HLA-C, HLA-DRB1, HMGA1, MSH3, NIPA1,

ALMS1	Alstrom syndrome, 203800 (3)
GPX1	Hemolytic anemia due to glutathione peroxidase deficiency, 614164 (1)
HLA-B	{Drug-induced liver injury due to flucloxacillin} (3) {Spondyloarthropathy, susceptibility to, 1}, 106300 (3) {Stevens-Johnson syndrome, susceptibility to}, 608579 (3) {Synovitis, chronic, susceptibility to} (3) {Toxic epidermal necrolysis, susceptibility to}, 608579 (3) {Abacavir hypersensitivity, susceptibility to} (3)
HLA-C	{HIV-1 viremia, susceptibility to}, 609423 (3) {Psoriasis susceptibility 1}, 177900 (3)
HLA-DRB1	{Multiple sclerosis, susceptibility to, 1}, 126200 (3) {Sarcoidosis, susceptibility to, 1}, 181000 (3)
HMGA1	{Diabetes mellitus, noninsulin-dependent, susceptibility to}, 125853 (3)
MSH3	Endometrial carcinoma, somatic, 608089 (3) Familial adenomatous polyposis 4, 617100 (3)
NIPA1	Spastic paraplegia 6, autosomal dominant, 600363 (3)

Genes at Clinical Genomics Database

ALMS1, HLA-B, MSH3, NIPA1,

ALMS1	Alstrom syndrome
HLA-B	Drug-induced toxicity, susceptibility to
MSH3	Endometrial carcinoma
NIPA1	Spastic paraplegia 6

Genes at HGMD

Summary

Number of Variants: 348
Number of Genes: 16

Export to: CSV

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Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	1	rs756789550 dbSNP Clinvar	20305466	679.96	GC...	G,...	PASS	1/2	25	None	None	None							None None	None None None None	PLA2G2A\|0.001433812\|93.16%
	View	combined sample_57.variant20	1	rs35220217,rs61261815 dbSNP Clinvar	46084614	2374.94	C	CT...	PASS	1/2	136	None	None	None							None None	None None None None	None
	View	combined sample_57.variant20	1	rs777404185 dbSNP Clinvar	31732602	1669.9	CAA	C,...	PASS	1/2	44	None	None	None							None None	None None None None	SNRNP40\|0.333005796\|25.25%
	View	combined sample_57.variant20	1	rs2292990 dbSNP Clinvar	32136168	4014.62	G	C,T	PASS	1/2	133	None	None	None	0.34046	0.44370					None None	None None None None	COL16A1\|0.160017905\|41.54%
	View	combined sample_57.variant20	1	rs71688304,rs68109314 dbSNP Clinvar	47074774	1618.02	TC...	T,...	PASS	1/2	53	None	None	None	0.32828	0.32830					None None	None None None None	MKNK1\|0.390435521\|21.38%,MOB3C\|0.199575043\|36.77%
	View	combined sample_57.variant20	1	rs759774432 dbSNP Clinvar	53291325	2024.96	TAAAA	TA...	PASS	1/2	61	None	None	None							None None	None None None None	ZYG11B\|0.340943905\|24.79%
	View	combined sample_57.variant20	1	rs147772009,rs78122321 dbSNP Clinvar	55080612	2367.76	GGTGT	G,...	PASS	1/2	71	None	None	None	0.00080	0.37860					None None	None None None None	ACOT11\|0.083532045\|54.52%,FAM151A\|0.008566095\|82.1%
IVL
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	1	rs7520711,rs758373475 dbSNP Clinvar	152882982	773.67	C	G,...	PASS	1/2	21	NON_SYNONYMOUS_CODING	MODERATE	None	0.42432	0.42430					None None	None None None None	IVL\|0.002902811\|88.82%
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	1	rs769477904 dbSNP Clinvar	95362927	3416.45	TA...	T,...	PASS	1/2	91	None	None	None							None None	None None None None	CNN3\|0.412846022\|19.98%
	View	combined sample_57.variant20	1	rs11412846 dbSNP Clinvar	154227292	1867.75	G	GT...	PASS	1/2	105	None	None	None							None None	None None None None	UBAP2L\|0.62847219\|10.84%
	View	combined sample_57.variant20	1	rs34824193 dbSNP Clinvar	210407339	454.88	T	TAA,A	PASS	1/2	29	None	None	None							None None	None None None None	SERTAD4\|0.28999354\|28.35%
	View	combined sample_57.variant20	2	rs80335157 dbSNP Clinvar	89103679	88.71	T	A,G	PASS	1/2	9	None	None	None							None None	None None None None	None
	View	combined sample_57.variant20	1	rs8658 dbSNP Clinvar	156706559	5984.76	A	C,G	PASS	1/2	147	None	None	None	0.32089	0.32090	0.28395				None None	None None None None	RRNAD1\|0.119124739\|47.57%
	View	combined sample_57.variant20	1	rs66818503 dbSNP Clinvar	161030059	151.1	CA	C,CAA	PASS	1/2	8	None	None	None							None None	None None None None	ARHGAP30\|0.052332049\|61.97%
	View	combined sample_57.variant20	1	rs767955754 dbSNP Clinvar	158584103	864.18	GA	GA...	PASS	1/2	35	None	None	None							None None	None None None None	SPTA1\|0.026631928\|71.06%
	View	combined sample_57.variant20	1	rs67195007 dbSNP Clinvar	176660047	699.68	TAA	T,...	PASS	1/2	67	None	None	None							None None	None None None None	PAPPA2\|0.127445387\|46.27%
	View	combined sample_57.variant20	1	rs5778295 dbSNP Clinvar	162750210	665.54	CTT	C,CT	PASS	1/2	11	None	None	None	0.94569	0.94570					None None	None None None None	DDR2\|0.353350559\|23.85%
	View	combined sample_57.variant20	1	rs781763279 dbSNP Clinvar	228107387	79.67	TA...	T,...	PASS	1/2	11	None	None	None							None None	None None None None	WNT9A\|0.206885197\|35.91%
	View	combined sample_57.variant20	1	rs67253020 dbSNP Clinvar	166944273	302.42	TCACA	T,...	PASS	1/2	5	None	None	None							None None	None None None None	ILDR2\|0.132084602\|45.59%
POU2F1
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	1	rs750339731 dbSNP Clinvar	167385324	2220.98	TA...	TA...	PASS	1/2	84	None	None	None							None None	None None None None	POU2F1\|0.805592985\|5.68%
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	1	rs755313416 dbSNP Clinvar	167389405	1467.81	CTT	C,CT	PASS	1/2	67	None	None	None							None None	None None None None	POU2F1\|0.805592985\|5.68%
	View	combined sample_57.variant20	1	rs79919750 dbSNP Clinvar	183907346	4020.25	A	T,...	PASS	1/2	82	None	None	None	0.57328	0.57330					None None	None None None None	COLGALT2\|0.160790212\|41.43%
	View	combined sample_57.variant20	1	rs11286665,rs796380446 dbSNP Clinvar	170633186	370.38	AT	A,ATT	PASS	1/2	18	None	None	None	0.74461	0.74460					None None	None None None None	PRRX1\|0.835904001\|4.95%
	View	combined sample_57.variant20	1	rs10925022 dbSNP Clinvar	247597365	983.6	G	A,...	PASS	1/2	8	None	None	None	0.11402	0.78870	0.09257				None None	None None None None	NLRP3\|0.017756451\|75.44%
	View	combined sample_57.variant20	1	rs11359233,rs559871316,rs796407219 dbSNP Clinvar	234444761	369.39	TA	T,...	PASS	1/2	6	None	None	None		0.51220					None None	None None None None	SLC35F3\|0.18177621\|38.81%
	View	combined sample_57.variant20	1	rs768439661 dbSNP Clinvar	236648008	130.55	GAA	G,GA	PASS	1/2	19	None	None	None							None None	None None None None	EDARADD\|0.085559692\|54.03%
	View	combined sample_57.variant20	1	rs625443,rs61021118,rs397749275 dbSNP Clinvar	236577762	234.78	C	T,CT	PASS	1/2	6	None	None	None	0.35803	0.63420					None None	None None None None	EDARADD\|0.085559692\|54.03%
	View	combined sample_57.variant20	1	rs797013428 dbSNP Clinvar	247921789	198.31	AGT	AG...	PASS	1/2	20	None	None	None							None None	None None None None	OR1C1\|0.00291809\|88.77%
	View	combined sample_57.variant20	2	rs879116936,rs750095117 dbSNP Clinvar	287448	474.57	TAAAA	T,...	PASS	1/2	35	None	None	None							None None	None None None None	FAM150B\|0.057005621\|60.68%
	View	combined sample_57.variant20	2	rs10176767 dbSNP Clinvar	3383538	4311.61	C	A,G	PASS	1/2	159	START_GAINED	LOW	None	0.09884	0.09884					None None	None None None None	TRAPPC12\|0.032917403\|68.19%
	View	combined sample_57.variant20	3	rs73124968 dbSNP Clinvar	75715699	728.45	G	T,...	PASS	1/2	36	None	None	None							None None	None None None None	FRG2C\|0.000891988\|96.07%
	View	combined sample_57.variant20	1	rs528097252 dbSNP Clinvar	245025697	485.6	T	TA...	PASS	1/2	25	None	None	None	0.49301						None None	None None None None	HNRNPU\|0.730032252\|7.66%
	View	combined sample_57.variant20	2	rs559913796,rs137982132 dbSNP Clinvar	25875401	518.6	T	TA...	PASS	1/2	36	None	None	None	0.41354	0.41350					None None	None None None None	DTNB\|0.389089308\|21.48%
	View	combined sample_57.variant20	2	rs765034384 dbSNP Clinvar	15491994	1434.63	GC...	G,...	PASS	1/2	58	None	None	None							None None	None None None None	NBAS\|0.065334691\|58.54%
	View	combined sample_57.variant20	2	.	27477627	1079.07	AA...	AA...	PASS	1/2	28	None	None	None							None None	None None None None	SLC30A3\|0.129189607\|45.99%
	View	combined sample_57.variant20	2	rs201208245 dbSNP Clinvar	28639331	812.04	CTTT	CT...	PASS	1/2	42	None	None	None							None None	None None None None	FOSL2\|0.332166248\|25.31%
	View	combined sample_57.variant20	2	rs796370758,rs566532541 dbSNP Clinvar	64859377	2176.63	CTTT	CT...	PASS	1/2	131	None	None	None							None None	None None None None	SERTAD2\|0.302602062\|27.45%
	View	combined sample_57.variant20	2	rs751957808 dbSNP Clinvar	28816814	1205.67	CT	CT...	PASS	1/2	47	None	None	None							None None	None None None None	PLB1\|0.018823638\|74.77%
	View	combined sample_57.variant20	2	rs4666165,rs750467812 dbSNP Clinvar	29281804	6417.9	T	G,...	PASS	1/2	112	None	None	None							None None	None None None None	FAM179A\|0.018817764\|74.77%
	View	combined sample_57.variant20	2	rs748383,rs553984516,rs66522956,rs61306029 dbSNP Clinvar	20872962	7404.75	G	GA,A	PASS	1/2	241	None	None	None	0.27456	0.27460					None None	None None None None	GDF7\|0.067640553\|57.97%
	View	combined sample_57.variant20	2	rs869027606 dbSNP Clinvar	71412707	40.96	GAA	G,...	PASS	1/2	9	None	None	None							None None	None None None None	PAIP2B\|0.390295972\|21.39%
ALMS1
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	2	rs864622738 dbSNP Clinvar	73613031	601.68	TG...	TG...	PASS	1/2	48	CODON_CHANGE_PLUS_CODON_INSERTION	MODERATE	None							None None	None None None None	ALMS1\|0.012791041\|78.65%
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	2	rs796462607 dbSNP Clinvar	85893616	341.26	CTGTG	CT...	PASS	1/2	24	None	None	None							None None	None None None None	SFTPB\|0.073486744\|56.65%
	View	combined sample_57.variant20	2	rs578062675,rs72207075 dbSNP Clinvar	71645628	296.7	G	GT...	PASS	1/2	26	None	None	None	0.18630	0.18630					None None	None None None None	ZNF638\|0.358569732\|23.54%
	View	combined sample_57.variant20	2	rs113873207,rs33971912,rs397774860 dbSNP Clinvar	97817564	3001.82	C	CT,T	PASS	1/2	75	None	None	None	1.00000	1.00000	0.00383				None None	None None None None	ANKRD36\|0.001192347\|94.46%
	View	combined sample_57.variant20	2	.	136664812	776.31	CTT	CT...	PASS	1/2	40	None	None	None							None None	None None None None	DARS\|0.817904855\|5.36%
	View	combined sample_57.variant20	2	rs140853322 dbSNP Clinvar	106510455	516.29	G	GC...	PASS	1/2	20	None	None	None							None None	None None None None	NCK2\|0.365054311\|23.08%
	View	combined sample_57.variant20	2	rs10636999,rs34014763,rs34269772 dbSNP Clinvar	128878979	213.99	C	CT...	PASS	1/2	24	None	None	None	0.47983	0.47980					None None	None None None None	UGGT1\|0.159062304\|41.71%
	View	combined sample_57.variant20	2	rs139356455,rs869049573,rs869287277,rs568451117 dbSNP Clinvar	119751769	340.72	AAAC	A,...	PASS	1/2	19	None	None	None	0.00938	0.55090					None None	None None None None	MARCO\|0.006454862\|84.11%
	View	combined sample_57.variant20	2	rs55733736,rs58035876,rs397948972 dbSNP Clinvar	120195700	2325.77	G	C,GC	PASS	1/2	64	None	None	None	0.98622	0.98620					None None	None None None None	TMEM37\|0.024253839\|72.11%
	View	combined sample_57.variant20	2	rs376694302,rs386391780,rs386391781,rs58044311 dbSNP Clinvar	170606984	1345.03	C	CA...	PASS	1/2	78	None	None	None	0.84465	0.84460					None None	None None None None	KLHL23\|0.405774237\|20.43%
	View	combined sample_57.variant20	2	rs75449999 dbSNP Clinvar	170939692	3822.5	T	TA...	PASS	1/2	68	None	None	None	0.34225	0.42930					None None	None None None None	UBR3\|0.480060593\|16.76%
	View	combined sample_57.variant20	2	rs10622340,rs33912607,rs72264805,rs34400634 dbSNP Clinvar	209223123	5376.91	G	GT...	PASS	1/2	182	None	None	None	0.84445	0.84440					None None	None None None None	PIKFYVE\|0.407766308\|20.32%
	View	combined sample_57.variant20	2	rs34788166,rs397971039 dbSNP Clinvar	203748544	602.12	A	AT...	PASS	1/2	26	None	None	None	0.00339	0.88540					None None	None None None None	WDR12\|0.769967473\|6.57%
	View	combined sample_57.variant20	2	rs71395583,rs59908560 dbSNP Clinvar	211320041	610.87	G	GA...	PASS	1/2	17	None	None	None	0.00100	0.50560					None None	None None None None	LANCL1\|0.234276925\|32.99%
	View	combined sample_57.variant20	2	rs561374954,rs149250772,rs56891056 dbSNP Clinvar	234545039	226.21	A	AT...	PASS	1/2	84	None	None	None	0.13039	0.48720					None None	None None None None	UGT1A8\|0.01975939\|74.32%
	View	combined sample_57.variant20	2	rs113821778,rs59847589 dbSNP Clinvar	207945785	1066.09	A	AT...	PASS	1/2	42	None	None	None							None None	None None None None	KLF7\|0.833104461\|5.04%
	View	combined sample_57.variant20	2	rs769930096 dbSNP Clinvar	225719781	1416.07	GA...	GA...	PASS	1/2	57	None	None	None							None None	None None None None	DOCK10\|0.382989612\|21.86%
	View	combined sample_57.variant20	2	rs11405075 dbSNP Clinvar	220466344	2213.2	G	GT...	PASS	1/2	128	None	None	None	0.59165						None None	None None None None	STK11IP\|0.024101698\|72.16%
	View	combined sample_57.variant20	3	rs73022117,rs3836383 dbSNP Clinvar	14706770	517.36	A	G,...	PASS	1/2	19	None	None	None	0.30391	0.30390					None None	None None None None	CCDC174\|0.058204393\|60.36%
	View	combined sample_57.variant20	3	.	10289706	2069.64	CTTT	CT...	PASS	1/2	84	None	None	None							None None	None None None None	None
CHL1
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	3	rs768683821 dbSNP Clinvar	239555	1186.5	CT	CT...	PASS	1/2	77	None	None	None							None None	None None None None	None
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	3	rs34961993,rs397750624 dbSNP Clinvar	20025665	7336.66	G	GA...	PASS	1/2	232	None	None	None	0.23982	0.47620					None None	None None None None	RAB5A\|0.620368662\|11.08%,PP2D1\|0.002863197\|88.92%
	View	combined sample_57.variant20	3	rs772179762 dbSNP Clinvar	37369771	1950.4	ACTCT	A,...	PASS	1/2	44	None	None	None	0.17153	0.17150					None None	None None None None	GOLGA4\|0.080020793\|55.16%
	View	combined sample_57.variant20	3	.	57335705	710.0	TA...	TA...	PASS	1/2	38	None	None	None							None None	None None None None	DNAH12\|0.248045233\|31.71%
GPX1
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	3	rs17838762,rs56041243 dbSNP Clinvar	49395673	3937.2	GG...	G,...	PASS	1/2	70	CODON_DELETION	MODERATE	None			0.42721				None None	None None None None	GPX1\|0.756845833\|6.93%
Omim - GeneCards - NCBI
	Options	Individual	Chr	RsId	Pos	Qual	Ref	Alt	Filter	Gen	Read Depth	Effect	Impact	Func Class	1kgenomes	dbSNP	ESP6500	Sift	PP2	CADD	M-CAP	CLINVAR	HI Score
	View	combined sample_57.variant20	3	rs62821060,rs869101624,rs397732523 dbSNP Clinvar	98518160	3885.32	T	TA...	PASS	1/2	152	None	None	None							None None	None None None None	ST3GAL6\|0.150858254\|42.85%,DCBLD2\|0.153168212\|42.49%
	View	combined sample_57.variant20	3	rs142854055,rs202115061 dbSNP Clinvar	52868668	745.35	G	GC...	PASS	1/2	59	None	None	None							None None	None None None None	MUSTN1\|0.079724722\|55.24%,TMEM110-MUSTN1\|0.26494415\|30.29%
	View	combined sample_57.variant20	3	rs878959636 dbSNP Clinvar	78666656	710.06	TA	TA...	PASS	1/2	34	None	None	None							None None	None None None None	ROBO1\|0.905688682\|3.33%
	View	combined sample_57.variant20	3	rs772972831,rs869250763 dbSNP Clinvar	129369121	1899.51	CAAA	CA...	PASS	1/2	77	None	None	None							None None	None None None None	TMCC1\|0.404814621\|20.48%
	View	combined sample_57.variant20	3	rs10576077 dbSNP Clinvar	93847398	452.78	CGT	C,...	PASS	1/2	12	None	None	None							None None	None None None None	None
	View	combined sample_57.variant20	3	rs796206524 dbSNP Clinvar	101370529	536.43	TAA	T,...	PASS	1/2	53	None	None	None							None None	None None None None	ZBTB11\|0.313137276\|26.59%
	View	combined sample_57.variant20	3	rs67083358,rs55876532 dbSNP Clinvar	120130883	1493.4	GA...	G,...	PASS	1/2	63	None	None	None							None None	None None None None	FSTL1\|0.635892351\|10.59%
	View	combined sample_57.variant20	3	rs9831600,rs200685111 dbSNP Clinvar	122259745	671.26	G	GT,T	PASS	1/2	22	None	None	None	0.08287	0.11960					None None	None None None None	PARP9\|0.003836221\|87.26%
	View	combined sample_57.variant20	3	rs66939946 dbSNP Clinvar	122478032	70.4	CCA	CC...	PASS	1/2	13	None	None	None							None None	None None None None	HSPBAP1\|0.054702078\|61.27%
	View	combined sample_57.variant20	3	rs377262480,rs5852785 dbSNP Clinvar	134204833	3512.57	GCCC	G,GCC	PASS	1/2	58	None	None	None	0.97943	0.97940					None None	None None None None	ANAPC13\|0.252416865\|31.34%,CEP63\|0.16402888\|41.02%
	View	combined sample_57.variant20	3	rs34045680,rs397784250,rs56195200 dbSNP Clinvar	129693108	954.24	T	TC...	PASS	1/2	12	None	None	None	0.95827	0.95830					None None	None None None None	None
	View	combined sample_57.variant20	3	rs146160361,rs869249152 dbSNP Clinvar	158537415	1163.94	CT...	C,...	PASS	1/2	18	None	None	None							None None	None None None None	MFSD1\|0.104583457\|50.31%
	View	combined sample_57.variant20	3	rs60278421,rs552273596,rs796447671 dbSNP Clinvar	186295417	1136.97	AT	A,ATT	PASS	1/2	54	None	None	None		0.27580					None None	None None None None	DNAJB11\|0.384461606\|21.76%
	View	combined sample_57.variant20	3	rs768666784 dbSNP Clinvar	149613232	2516.18	ATTT	A,...	PASS	1/2	118	None	None	None							None None	None None None None	ANKUB1\|0.042457252\|64.97%,RNF13\|0.323763201\|25.9%
	View	combined sample_57.variant20	3	rs35287754,rs397761777 dbSNP Clinvar	149683496	1170.22	A	AG...	PASS	1/2	39	None	None	None	0.97604	0.97600					None None	None None None None	ANKUB1\|0.042457252\|64.97%,PFN2\|0.76793452\|6.66%
	View	combined sample_57.variant20	5	rs745716167 dbSNP Clinvar	137847092	81.17	TAC	T,...	PASS	1/2	50	None	None	None							None None	None None None None	ETF1\|0.922396234\|2.93%
	View	combined sample_57.variant20	3	rs35004235,rs398082737 dbSNP Clinvar	183814722	270.29	CA	C,CAA	PASS	1/2	20	None	None	None	0.05931	0.60780					None None	None None None None	None
	View	combined sample_57.variant20	3	rs369017657 dbSNP Clinvar	187009803	94.76	C	CT...	PASS	1/2	7	None	None	None							None None	None None None None	MASP1\|0.188756952\|37.98%
	View	combined sample_57.variant20	4	rs377096563,rs4647926 dbSNP Clinvar	1806012	888.03	TG	T,TGG	PASS	1/2	57	None	None	None	0.38698	0.38700					None None	None None None None	FGFR3\|0.776648495\|6.4%
	View	combined sample_57.variant20	3	rs375215213,rs71180934 dbSNP Clinvar	195295708	1514.42	G	GG...	PASS	1/2	47	None	None	None	0.03994	0.18610					None None	None None None None	APOD\|0.102094416\|50.79%
	View	combined sample_57.variant20	4	rs148908322,rs59952822 dbSNP Clinvar	10525711	180.63	A	AG...	PASS	1/2	23	None	None	None	0.71745	0.71750					None None	None None None None	CLNK\|0.005919624\|84.67%
	View	combined sample_57.variant20	4	.	16085931	4512.6	AA...	AA...	PASS	1/2	71	None	None	None							None None	None None None None	PROM1\|0.156059694\|42.13%
	View	combined sample_57.variant20	4	rs70947158,rs397995883 dbSNP Clinvar	155225784	1104.39	AA...	A,...	PASS	1/2	24	None	None	None	0.03494	0.51900					None None	None None None None	DCHS2\|0.027332994\|70.73%
	View	combined sample_57.variant20	4	.	17633666	5033.11	AT...	A,...	PASS	1/2	118	None	None	None							None None	None None None None	MED28\|0.193447823\|37.48%,FAM184B\|0.029449626\|69.64%
	View	combined sample_57.variant20	4	rs200401097,rs538098842,rs567463413 dbSNP Clinvar	77065476	2780.55	TAAA	T,...	PASS	1/2	46	None	None	None		0.21250					None None	None None None None	NUP54\|0.507295203\|15.51%
	View	combined sample_57.variant20	4	rs59335499,rs750605866 dbSNP Clinvar	77105952	575.42	A	AT...	PASS	1/2	16	None	None	None	0.41873	0.41870					None None	None None None None	SCARB2\|0.345851225\|24.43%
	View	combined sample_57.variant20	4	rs777531092 dbSNP Clinvar	78635592	1373.42	TA...	TA...	PASS	1/2	52	None	None	None							None None	None None None None	CNOT6L\|0.809704188\|5.58%
	View	combined sample_57.variant20	4	rs5860842 dbSNP Clinvar	107957516	324.35	CT	C,...	PASS	1/2	33	None	None	None	0.50260	0.50260					None None	None None None None	DKK2\|0.664974812\|9.53%
	View	combined sample_57.variant20	4	rs200266917 dbSNP Clinvar	164245892	5511.13	GAA	G,GA	PASS	1/2	198	None	None	None							None None	None None None None	NPY1R\|0.220873712\|34.33%
	View	combined sample_57.variant20	4	.	147563008	1029.47	TAC	TA...	PASS	1/2	38	None	None	None							None None	None None None None	POU4F2\|0.829800839\|5.08%
	View	combined sample_57.variant20	4	rs33986267 dbSNP Clinvar	167012250	621.9	T	TAA,A	PASS	1/2	21	None	None	None	0.79653	0.79650	0.07512				None None	None None None None	TLL1\|0.379668997\|22.07%
	View	combined sample_57.variant20	4	rs796754458 dbSNP Clinvar	169849477	5163.82	TA	T,TAA	PASS	1/2	180	None	None	None	0.06270	0.69890					None None	None None None None	PALLD\|0.242896588\|32.2%,CBR4\|0.148986414\|43.14%
	View	combined sample_57.variant20	4	rs10622647 dbSNP Clinvar	190329166	1765.28	G	GC...	PASS	1/2	43	None	None	None	0.47085	0.47080					None None	None None None None	None
	View	combined sample_57.variant20	5	rs11370960,rs397789444,rs369965853 dbSNP Clinvar	34685125	7434.25	A	AT...	PASS	1/2	262	None	None	None	0.36182	0.62560					None None	None None None None	RAI14\|0.371047945\|22.65%

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