+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

+ Genes 1

Genes:
TRIOBP,

+ Genes associated with diseases 1

Genes at Omim

TRIOBP,
TRIOBP Deafness, autosomal recessive 28, 609823 (3)

Genes at Clinical Genomics Database

TRIOBP,
TRIOBP Deafness, autosomal recessive 28

Genes at HGMD

Summary

Number of Variants: 11
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

TRIOBP
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_51.variant15 22 rs12628603
dbSNP Clinvar 		38119213 3858.58 G A PASS 1/1 213 NON_SYNONYMOUS_CODING MODERATE None 0.52656 0.52660 0.45627 0.01 0.83 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs55745992
dbSNP Clinvar 		38119754 1018.98 TCAA T PASS 1/1 216 CODON_CHANGE_PLUS_CODON_DELETION MODERATE None 0.33626 0.33630 0.35319 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs75659869
dbSNP Clinvar 		38119869 1432.74 G A PASS 0/1 182 NON_SYNONYMOUS_CODING MODERATE None 0.02476 0.02476 0.05588 0.31 0.06 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs36219868
dbSNP Clinvar 		38120175 586.0 GCCT G PASS 0/1 314 CODON_CHANGE_PLUS_CODON_DELETION MODERATE None 0.25040 0.25040 0.27879 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs9610841
dbSNP Clinvar 		38121152 2965.27 C A PASS 1/1 396 NON_SYNONYMOUS_CODING MODERATE None 0.33626 0.33630 0.34641 0.00 0.30 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs5756795
dbSNP Clinvar 		38122122 1712.57 T C PASS 1/1 267 NON_SYNONYMOUS_CODING MODERATE None 0.33666 0.33670 0.35010 0.18 0.01 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs739137
dbSNP Clinvar 		38122448 1049.94 C T PASS 1/1 92 SYNONYMOUS_CODING LOW None 0.33666 0.33670 0.34194 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs739138
dbSNP Clinvar 		38122462 803.15 A G PASS 1/1 82 NON_SYNONYMOUS_CODING MODERATE None 0.60104 0.60100 0.36895 1.00 0.00 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs7284476
dbSNP Clinvar 		38129332 2250.97 G A PASS 1/1 151 SYNONYMOUS_CODING LOW None 0.33726 0.33730 0.35026 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs8140958
dbSNP Clinvar 		38130472 5747.43 T C PASS 1/1 268 NON_SYNONYMOUS_CODING MODERATE None 0.98263 0.98260 0.03526 1.00 0.00 None None None None None None TRIOBP|0.083019472|54.57%
View combined sample_51.variant15 22 rs11704996
dbSNP Clinvar 		38151170 1974.26 G A PASS 0/1 126 SYNONYMOUS_CODING LOW None 0.03954 0.03954 0.05467 None None None None None None TRIOBP|0.083019472|54.57%
  • Page 1 of 1