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SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes 1

Genes:
FRG2C,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 8
Number of Genes: 1

Export to: CSV
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FRG2C
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 16hpc01701_s1 genome 3 rs73840318
dbSNP Clinvar 		75713669 4.97 G A LowGQX;SB 0/1 2 NON_SYNONYMOUS_CODING MODERATE None 0.43 0.00 None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 rs73840323
dbSNP Clinvar 		75714337 9.8 T G LowGQ;LowGQX;SB 1/1 1 NON_SYNONYMOUS_CODING MODERATE None 1.00 0.00 None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 rs73840324
dbSNP Clinvar 		75714345 9.8 G T LowGQ;LowGQX;SB 1/1 1 NON_SYNONYMOUS_CODING MODERATE None 0.01 0.24 None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 rs73840339
dbSNP Clinvar 		75715118 14.92 G A LowGQ;LowGQX 1/1 2 NON_SYNONYMOUS_CODING MODERATE None 0.01 0.00 None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 rs72503535
dbSNP Clinvar 		75715124 14.92 C T LowGQ;LowGQX 1/1 2 NON_SYNONYMOUS_CODING MODERATE None 0.27 1.00 None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 . 75715173 14.92 C T LowGQ;LowGQX 1/1 2 NON_SYNONYMOUS_CODING MODERATE None 0.26 0.99 None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 . 75715174 14.92 T G LowGQ;LowGQX 1/1 2 SYNONYMOUS_CODING LOW None None None None None None None FRG2C|0.000891988|96.07%
View 16hpc01701_s1 genome 3 . 75715181 14.92 G A LowGQ;LowGQX 1/1 2 NON_SYNONYMOUS_CODING MODERATE None 0.00 0.16 None None None None None None FRG2C|0.000891988|96.07%
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