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 GROUPS:

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 CHR:

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EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

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VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
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FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

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EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

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CADD

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EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes 1

Genes:
TGM4,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 5
Number of Genes: 1

Export to: CSV
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TGM4
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 94533-0209701724_ms_onbait 3 rs2271087
dbSNP Clinvar 		44929287 1943190.09 G C PASS 1/1 87 NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION MODERATE None 0.42712 0.42710 0.25434 0.01 0.18 None None None None None None TGM4|0.001325169|93.73%
View 94533-0209701724_ms_onbait 3 rs1995640
dbSNP Clinvar 		44943069 1347520.28 C T PASS 1/1 62 SYNONYMOUS_CODING LOW None 0.56729 0.56730 0.44556 None None None None None None TGM4|0.001325169|93.73%
View 94533-0209701724_ms_onbait 3 rs1995641
dbSNP Clinvar 		44943389 3867009.33 G A PASS 1/1 62 NON_SYNONYMOUS_CODING MODERATE None 0.55511 0.55510 0.43295 0.43 0.13 None None None None None None TGM4|0.001325169|93.73%
View 94533-0209701724_ms_onbait 3 rs3749195
dbSNP Clinvar 		44948479 1212304.19 C T PASS 1/1 31 NON_SYNONYMOUS_CODING MODERATE None 0.67452 0.67450 0.46763 0.02 0.43 None None None None None None TGM4|0.001325169|93.73%
View 94533-0209701724_ms_onbait 3 rs9876921
dbSNP Clinvar 		44948590 2732497.68 G A PASS 1/1 75 NON_SYNONYMOUS_CODING MODERATE None 0.61941 0.61940 0.47001 0.15 0.00 None None None None None None TGM4|0.001325169|93.73%
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