SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 9
Number of Genes: 1

Export to: CSV
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GRM7

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 94533-0209701724_ms_onbait 3 rs2229902
dbSNP Clinvar
7494417 1729850.19 A T PASS 0/1 118 NON_SYNONYMOUS_CODING MODERATE None 0.15735 0.15730 0.32093 0.65 0.18 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs11924839
dbSNP Clinvar
6828348 765670.75 A C PASS 0/1 116 None None None 0.12979 0.12980 0.00 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs34373930
dbSNP Clinvar
7620168 1941292.21 A G PASS 0/1 78 SYNONYMOUS_CODING LOW None 0.17053 0.17050 0.21283 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs7614915
dbSNP Clinvar
7620382 2496166.61 C T PASS 0/1 115 SYNONYMOUS_CODING LOW None 0.17033 0.17030 0.21283 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs1485175
dbSNP Clinvar
7620789 4026721.91 T C PASS 0/1 157 SYNONYMOUS_CODING LOW None 0.52556 0.52560 0.43541 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs1485174
dbSNP Clinvar
7620828 1748116.64 G A PASS 0/1 166 SYNONYMOUS_CODING LOW None 0.17073 0.17070 0.21221 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 . 7732726 234846.15 ATT AT PASS 1/1 15 None None None None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs1533434
dbSNP Clinvar
6828364 4107568.45 A G PASS 0/1 117 None None None 0.55112 0.55110 0.00 None None None None None None GRM7|0.691014727|8.74%
View 94533-0209701724_ms_onbait 3 rs3749380
dbSNP Clinvar
6903297 2542133.97 C T PASS 0/1 105 SYNONYMOUS_CODING LOW None 0.41693 0.41690 0.35883 None None None None None None GRM7|0.691014727|8.74%
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