+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

+ Genes 1

Genes:
PLIN4,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 22
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

PLIN4
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 94533-0209701724_ms_onbait 19 rs10422854
dbSNP Clinvar 		4511284 5742101.17 A G PASS 0/1 139 SYNONYMOUS_CODING LOW None 0.00679 0.00679 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs8105775
dbSNP Clinvar 		4508945 3379932.47 A G PASS 1/1 66 SYNONYMOUS_CODING LOW None 0.99840 0.99840 0.00131 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7251858
dbSNP Clinvar 		4510560 1443905.57 C T PASS 0/1 65 NON_SYNONYMOUS_CODING MODERATE None 0.35463 0.35460 0.29743 0.04 0.45 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7255715
dbSNP Clinvar 		4511140 7166840.43 C G PASS 0/1 120 SYNONYMOUS_CODING LOW None 0.61122 0.61120 0.41916 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs10422078
dbSNP Clinvar 		4511278 5926851.56 C T PASS 0/1 140 SYNONYMOUS_CODING LOW None 0.00120 0.00120 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs80238130
dbSNP Clinvar 		4511283 5783843.72 C T PASS 0/1 139 NON_SYNONYMOUS_CODING MODERATE None 0.00160 0.00160 1.00 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7255187
dbSNP Clinvar 		4511453 12904980.92 G A PASS 1/1 206 NON_SYNONYMOUS_CODING MODERATE None 0.89237 0.89240 0.13020 1.00 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7256712
dbSNP Clinvar 		4511525 14211099.24 A G PASS 1/1 225 NON_SYNONYMOUS_CODING MODERATE None 0.93211 0.93210 0.68 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7256387
dbSNP Clinvar 		4511647 8339869.0 C G PASS 1/1 90 NON_SYNONYMOUS_CODING MODERATE None 0.00579 0.00579 0.17945 1.00 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs73920825
dbSNP Clinvar 		4511725 5288664.08 T C PASS 1/1 17 SYNONYMOUS_CODING LOW None 0.87400 0.87400 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs62115190
dbSNP Clinvar 		4511730 5440562.07 T C PASS 0/1 16 NON_SYNONYMOUS_CODING MODERATE None 0.00040 0.00040 1.00 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs10424401
dbSNP Clinvar 		4511929 9635848.52 A G PASS 0/1 204 SYNONYMOUS_CODING LOW None 0.62340 0.62340 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7257142
dbSNP Clinvar 		4511830 6404317.17 A G PASS 0/1 191 SYNONYMOUS_CODING LOW None None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs10423606
dbSNP Clinvar 		4511908 5747308.61 C T PASS 0/1 203 SYNONYMOUS_CODING LOW None None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs28460600
dbSNP Clinvar 		4511920 4247755.91 T C PASS 0/1 198 SYNONYMOUS_CODING LOW None None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs10422025
dbSNP Clinvar 		4511927 9519937.23 G A PASS 0/1 200 NON_SYNONYMOUS_CODING MODERATE None 0.57228 0.57230 1.00 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7260518
dbSNP Clinvar 		4511955 14903873.96 T C PASS 1/1 194 NON_SYNONYMOUS_CODING MODERATE None 0.87999 0.88000 0.11092 1.00 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs7259625
dbSNP Clinvar 		4512514 4216680.93 G C PASS 0/1 124 SYNONYMOUS_CODING LOW None 0.35883 0.35880 0.40686 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs55901236
dbSNP Clinvar 		4512669 4897280.05 T C PASS 0/1 113 NON_SYNONYMOUS_CODING MODERATE None 0.45407 0.45410 0.43092 0.26 0.01 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs112063407
dbSNP Clinvar 		4512748 2676221.24 T C PASS 0/1 135 SYNONYMOUS_CODING LOW None 0.11701 0.11700 0.21659 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 rs4807597
dbSNP Clinvar 		4513559 6411367.02 A G PASS 1/1 48 NON_SYNONYMOUS_CODING MODERATE None 0.96206 0.96210 0.03410 0.87 0.00 None None None None None None PLIN4|0.000829699|96.5%
View 94533-0209701724_ms_onbait 19 . 4511350 11780876.94 TT... AT... PASS 0/1 160 NON_SYNONYMOUS_CODING MODERATE None None None None None None None PLIN4|0.000829699|96.5%
  • Page 1 of 1