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SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes 1

Genes:
IGSF22,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 7
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

IGSF22
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View el-exome_s1 11 rs57253324
dbSNP Clinvar 		18729367 916.22 G T PASS 1/1 34 SYNONYMOUS_CODING LOW None 0.11042 0.11040 0.09965 None None None None None None IGSF22|0.033026723|68.14%
View el-exome_s1 11 rs111397851
dbSNP Clinvar 		18735480 477.89 G A PASS 0/1 38 NON_SYNONYMOUS_CODING MODERATE None 0.04712 0.04712 0.05478 0.04 0.99 None None None None None None IGSF22|0.033026723|68.14%
View el-exome_s1 11 rs7125943
dbSNP Clinvar 		18735947 236.19 T C PASS 0/1 21 NON_SYNONYMOUS_CODING MODERATE None 0.75619 0.75620 0.22870 1.00 0.00 None None None None None None IGSF22|0.033026723|68.14%
View el-exome_s1 11 rs4424652
dbSNP Clinvar 		18737095 617.45 C T PASS 0/1 94 NON_SYNONYMOUS_CODING MODERATE None 0.74940 0.74940 0.24237 0.05 0.04 None None None None None None IGSF22|0.033026723|68.14%
View el-exome_s1 11 rs10766494
dbSNP Clinvar 		18738281 468.69 C T PASS 0/1 34 NON_SYNONYMOUS_CODING MODERATE None 0.74900 0.74900 0.23953 1.00 0.00 None None None None None None IGSF22|0.033026723|68.14%
View el-exome_s1 11 rs74743312
dbSNP Clinvar 		18740268 308.72 C T PASS 0/1 28 NON_SYNONYMOUS_CODING MODERATE None 0.00300 0.00300 0.00773 0.52 0.37 None None None None None None IGSF22|0.033026723|68.14%
View el-exome_s1 11 rs10832975
dbSNP Clinvar 		18743180 283.76 C G PASS 0/1 49 NON_SYNONYMOUS_CODING MODERATE None 0.36002 0.36000 0.33645 1.00 0.00 None None None None None None IGSF22|0.033026723|68.14%
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