SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:
ABCC2, ABLIM1, ADAM12, ADAM8, ADAMTS14, ADIRF, ADRB1, AFAP1L2, AGAP7, AIFM2, AKR1C3, AKR1C4, ALOX5, ANK3, ANKRD16, ANKRD2, ANKRD30A, ANXA11, ARHGAP19, ARHGAP21, ARHGAP22, ARMC3, ARMC4, ARMS2, ATE1, ATRNL1, BAG3, BAMBI, BEND7, BICC1, BMPR1A, BMS1, BTBD16, C10ORF68, C10orf107, C10orf118, C10orf120, C10orf129, C10orf25, C10orf35, C10orf53, C10orf54, C10orf67, C10orf95, CACNB2, CALHM1, CALHM3, CALY, CAMK2G, CCAR1, CCDC3, CCDC6, CCNY, CDH23, CDHR1, CELF2, CEP55, CH25H, CHAT, CHST15, CNNM2, COL13A1, COL17A1, CPEB3, CPXM2, CTBP2, CUBN, CUL2, CUZD1, CWF19L1, CYP17A1, CYP26A1, CYP26C1, CYP2C8, CYP2E1, DCLRE1A, DCLRE1C, DDX50, DHTKD1, DHX32, DIP2C, DKK1, DLG5, DMBT1, DNA2, DNAJB12, DNAJC1, DNMBP, DNTT, DOCK1, DPYSL4, DUSP5, DYDC2, EBF3, EBLN1, ECHDC3, ECHS1, EGR2, EIF4EBP2, ENO4, EPC1, ERCC6, ERCC6-PGBD3, ERLIN1, EXOC6, FAM13C, FAM160B1, FAM170B, FAM175B, FAM178A, FAM196A, FAM208B, FAM24B, FAM35A, FAM45A, FANK1, FAS, FGFR2, FRA10AC1, FRMPD2, GBF1, GFRA1, GPAM, GPR123, GPR158, GPR26, GPRIN2, GSTO1, GSTO2, GTPBP4, HABP2, HELLS, HIF1AN, HK1, HKDC1, HPS1, HPSE2, HSPA12A, IFIT1, IFIT1B, IFIT2, IFIT5, INA, INPP5F, IPMK, ITGA8, ITIH2, ITIH5, JAKMIP3, JMJD1C, KAZALD1, KIAA1217, KIAA1279, KIAA1462, KIF20B, LGI1, LHPP, LIPA, LIPF, LIPJ, LIPK, LIPN, LOXL4, LRIT1, LRIT2, LRRC18, LRRC27, LZTS2, MAP3K8, MASTL, MAT1A, MBL2, MCM10, MEIG1, MKI67, MLLT10, MMRN2, MMS19, MSRB2, MTG1, MTRNR2L5, MTRNR2L7, MYO3A, MYOF, MYPN, NCOA4, NDST2, NEBL, NET1, NEURL1, NEUROG3, NFKB2, NHLRC2, NKX1-2, NKX2-3, NKX6-2, NOC3L, NODAL, NPY4R, NRAP, NRG3, NRP1, NT5C2, OBFC1, OGDHL, OLAH, OPN4, OPTN, OR13A1, PALD1, PANK1, PAOX, PARD3, PBLD, PCDH15, PCGF6, PDCD11, PDCD4, PDE6C, PFKP, PHYHIPL, PIK3AP1, PIP4K2A, PITRM1, PLAU, PLCE1, PLEKHA1, PLEKHS1, PLXDC2, PNLIP, PNLIPRP1, PNLIPRP2, PNLIPRP3, PPAPDC1A, PPP2R2D, PRF1, PRLHR, PSTK, PTCHD3, PTPRE, PWWP2B, R3HCC1L, RAB11FIP2, RBM20, RBP3, RET, RNLS, RPP38, RRP12, RSU1, RTKN2, RUFY2, SCD, SEC23IP, SEC61A2, SEMA4G, SEPHS1, SFMBT2, SFR1, SFTPA1, SFTPA2, SFTPD, SFXN4, SGMS1, SGPL1, SH2D4B, SLC18A2, SLC18A3, SLC29A3, SLC39A12, SLIT1, SMC3, SORBS1, SORCS3, SPAG6, SRGN, STAM, STAMBPL1, STK32C, SUPV3L1, SVIL, SYT15, TACC2, TAF3, TBC1D12, TCERG1L, TCTN3, TECTB, TET1, THNSL1, TLL2, TM9SF3, TMEM180, TMEM72, TNKS2, TRUB1, TSPAN14, TTC40, TUBAL3, TUBB8, TUBGCP2, TYSND1, UCMA, UCN3, UNC5B, VCL, VDAC2, VENTX, VSTM4, WAPAL, WBP1L, WDFY4, WDR11, WDR37, WDR96, ZDHHC6, ZFYVE27, ZMIZ1, ZNF239, ZNF33A, ZNF365, ZNF438, ZNF503, ZSWIM8, ZWINT,

Genes at Omim

ABCC2, ADRB1, AKR1C4, ALOX5, ANK3, ANXA11, ARMC4, BAG3, BICC1, BMPR1A, BMS1, CACNB2, CDH23, CDHR1, CEP55, CHAT, CNNM2, COL13A1, COL17A1, CUBN, CWF19L1, CYP17A1, CYP26C1, CYP2C8, DCLRE1C, DHTKD1, DNA2, EBF3, ECHS1, EGR2, ERCC6, ERLIN1, FAS, FGFR2, HABP2, HELLS, HK1, HPS1, HPSE2, ITGA8, KIAA1279, LGI1, LIPA, LIPN, MAP3K8, MAT1A, MBL2, MYO3A, MYPN, NEUROG3, NFKB2, NHLRC2, NKX6-2, NODAL, NT5C2, OPTN, PCDH15, PDE6C, PLAU, PLCE1, PNLIP, PRF1, RBM20, RBP3, RET, SFTPA2, SFXN4, SGPL1, SLC18A2, SLC18A3, SLC29A3, SMC3, TCTN3, TUBB8, VCL, WDR11, ZFYVE27, ZNF365,
ABCC2 Dubin-Johnson syndrome, 237500 (3)
ADRB1 [Resting heart rate], 607276 (3)
{Congestive heart failure and beta-blocker response, modifier of} (3)
AKR1C4 {46XY sex reversal 8, modifier of}, 614279 (3)
ALOX5 {Asthma, diminished response to antileukotriene treatment in}, 600807 (3)
{Atherosclerosis, susceptibility to} (3)
ANK3 ?Mental retardation, autosomal recessive, 37, 615493 (3)
ANXA11 Amytrophic lateral sclerosis 23, 617839 (3)
ARMC4 Ciliary dyskinesia, primary, 23, 615451 (3)
BAG3 Cardiomyopathy, dilated, 1HH, 613881 (3)
Myopathy, myofibrillar, 6, 612954 (3)
BICC1 {Renal dysplasia, cystic, susceptibility to}, 601331 (3)
BMPR1A Juvenile polyposis syndrome, infantile form, 174900 (3)
Polyposis syndrome, hereditary mixed, 2, 610069 (3)
Polyposis, juvenile intestinal, 174900 (3)
BMS1 ?Aplasia cutis congenita, nonsyndromic, 107600 (3)
CACNB2 Brugada syndrome 4, 611876 (3)
CDH23 Deafness, autosomal recessive 12, 601386 (3)
{Pituitary adenoma 5, multiple types}, 617540 (3)
Usher syndrome, type 1D, 601067 (3)
Usher syndrome, type 1D/F digenic, 601067 (3)
CDHR1 Cone-rod dystrophy 15, 613660 (3)
Retinitis pigmentosa 65, 613660 (3)
CEP55 Multinucleated neurons, anhydramnios, renal dysplasia, cerebellar hypoplasia, and hydranencephaly, 236500 (3)
CHAT Myasthenic syndrome, congenital, 6, presynaptic, 254210 (3)
CNNM2 Hypomagnesemia 6, renal, 613882 (3)
Hypomagnesemia, seizures, and mental retardation, 616418 (3)
COL13A1 Myasthenic syndrome, congenital, 19, 616720 (3)
COL17A1 Epidermolysis bullosa, junctional, localisata variant, 226650 (3)
Epidermolysis bullosa, junctional, non-Herlitz type, 226650 (3)
Epithelial recurrent erosion dystrophy, 122400 (3)
CUBN Megaloblastic anemia-1, Finnish type, 261100 (3)
CWF19L1 Spinocerebellar ataxia, autosomal recessive 17, 616127 (3)
CYP17A1 17,20-lyase deficiency, isolated, 202110 (3)
17-alpha-hydroxylase/17,20-lyase deficiency, 202110 (3)
CYP26C1 Focal facial dermal dysplasia 4, 614974 (3)
CYP2C8 {Drug metabolism, altered, CYP2C8-related}, 618018 (3)
DCLRE1C Omenn syndrome, 603554 (3)
Severe combined immunodeficiency, Athabascan type, 602450 (3)
DHTKD1 2-aminoadipic 2-oxoadipic aciduria, 204750 (3)
?Charcot-Marie-Tooth disease, axonal, type 2Q, 615025 (3)
DNA2 Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 6, 615156 (3)
?Seckel syndrome 8, 615807 (3)
EBF3 Hypotonia, ataxia, and delayed development syndrome, 617330 (3)
ECHS1 Mitochondrial short-chain enoyl-CoA hydratase 1 deficiency, 616277 (3)
EGR2 Charcot-Marie-Tooth disease, type 1D, 607678 (3)
Hypomyelinating neuropathy, congenital, 1, 605253 (3)
Dejerine-Sottas disease, 145900 (3)
ERCC6 Cerebrooculofacioskeletal syndrome 1, 214150 (3)
{Lung cancer, susceptibility to}, 211980 (3)
{Macular degeneration, age-related, susceptibility to, 5}, 613761 (3)
Cockayne syndrome, type B, 133540 (3)
De Sanctis-Cacchione syndrome, 278800 (3)
Premature ovarian failure 11, 616946 (3)
UV-sensitive syndrome 1, 600630 (3)
ERLIN1 Spastic paraplegia 62, 615681 (3)
FAS Autoimmune lymphoproliferative syndrome, type IA, 601859 (3)
Squamous cell carcinoma, burn scar-related, somatic (3)
{Autoimmune lymphoproliferative syndrome}, 601859 (3)
FGFR2 Antley-Bixler syndrome without genital anomalies or disordered steroidogenesis, 207410 (3)
Apert syndrome, 101200 (3)
Gastric cancer, somatic, 613659 (3)
Beare-Stevenson cutis gyrata syndrome, 123790 (3)
Bent bone dysplasia syndrome, 614592 (3)
Craniofacial-skeletal-dermatologic dysplasia, 101600 (3)
Craniosynostosis, nonspecific (3)
Crouzon syndrome, 123500 (3)
Jackson-Weiss syndrome, 123150 (3)
LADD syndrome, 149730 (3)
Pfeiffer syndrome, 101600 (3)
Saethre-Chotzen syndrome, 101400 (3)
Scaphocephaly and Axenfeld-Rieger anomaly (3)
Scaphocephaly, maxillary retrusion, and mental retardation, 609579 (3)
HABP2 {Venous thromboembolism, susceptibility to}, 188050 (3)
{?Thyroid cancer, nonmedullary, 5}, 616535 (3)
HELLS Immunodeficiency-centromeric instability-facial anomalies syndrome 4, 616911 (3)
HK1 Hemolytic anemia due to hexokinase deficiency, 235700 (3)
Neuropathy, hereditary motor and sensory, Russe type, 605285 (3)
Retinitis pigmentosa 79, 617460 (3)
HPS1 Hermansky-Pudlak syndrome 1, 203300 (3)
HPSE2 Urofacial syndrome 1, 236730 (3)
ITGA8 Renal hypodysplasia/aplasia 1, 191830 (3)
KIAA1279 Goldberg-Shprintzen megacolon syndrome, 609460 (3)
LGI1 Epilepsy, familial temporal lobe, 1, 600512 (3)
LIPA Cholesteryl ester storage disease, 278000 (3)
Wolman disease, 278000 (3)
LIPN Ichthyosis, congenital, autosomal recessive 8, 613943 (3)
MAP3K8 Lung cancer, somatic, 211980 (3)
MAT1A Hypermethioninemia, persistent, autosomal dominant, due to methionine adenosyltransferase I/III deficiency, 250850 (3)
Methionine adenosyltransferase deficiency, autosomal recessive, 250850 (3)
MBL2 {Chronic infections, due to MBL deficiency}, 614372 (3)
MYO3A Deafness, autosomal recessive 30, 607101 (3)
MYPN Cardiomyopathy, dilated, 1KK, 615248 (3)
Cardiomyopathy, familial restrictive, 4, 615248 (3)
Cardiomyopathy, hypertrophic, 22, 615248 (3)
Nemaline myopathy 11, autosomal recessive, 617336 (3)
NEUROG3 Diarrhea 4, malabsorptive, congenital, 610370 (3)
NFKB2 Immunodeficiency, common variable, 10, 615577 (3)
NHLRC2 FINCA syndrome, 618278 (3)
NKX6-2 Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy, 617560 (3)
NODAL Heterotaxy, visceral, 5, 270100 (3)
NT5C2 Spastic paraplegia 45, autosomal recessive, 613162 (3)
OPTN {Glaucoma, normal tension, susceptibility to}, 606657 (3)
Amyotrophic lateral sclerosis 12, 613435 (3)
Glaucoma 1, open angle, E, 137760 (3)
PCDH15 Deafness, autosomal recessive 23, 609533 (3)
Usher syndrome, type 1D/F digenic, 601067 (3)
Usher syndrome, type 1F, 602083 (3)
PDE6C Cone dystrophy 4, 613093 (3)
PLAU Quebec platelet disorder, 601709 (3)
{Alzheimer disease, late-onset, susceptibility to}, 104300 (3)
PLCE1 Nephrotic syndrome, type 3, 610725 (3)
PNLIP ?Pancreatic lipase deficiency, 614338 (3)
PRF1 Aplastic anemia, 609135 (3)
Hemophagocytic lymphohistiocytosis, familial, 2, 603553 (3)
Lymphoma, non-Hodgkin, 605027 (3)
RBM20 Cardiomyopathy, dilated, 1DD, 613172 (3)
RBP3 ?Retinitis pigmentosa 66, 615233 (3)
RET {Hirschsprung disease, protection against}, 142623 (3)
{Hirschsprung disease, susceptibility to, 1}, 142623 (3)
Central hypoventilation syndrome, congenital, 209880 (3)
Medullary thyroid carcinoma, 155240 (3)
Multiple endocrine neoplasia IIA, 171400 (3)
Multiple endocrine neoplasia IIB, 162300 (3)
Pheochromocytoma, 171300 (3)
SFTPA2 Pulmonary fibrosis, idiopathic, 178500 (3)
SFXN4 Combined oxidative phosphorylation deficiency 18, 615578 (3)
SGPL1 Nephrotic syndrome, type 14, 617575 (3)
SLC18A2 ?Parkinsonism-dystonia, infantile, 2, 618049 (3)
SLC18A3 Myasthenic syndrome, congenital, 21, presynaptic, 617239 (3)
SLC29A3 Histiocytosis-lymphadenopathy plus syndrome, 602782 (3)
SMC3 Cornelia de Lange syndrome 3, 610759 (3)
TCTN3 Joubert syndrome 18, 614815 (3)
Orofaciodigital syndrome IV, 258860 (3)
TUBB8 Oocyte maturation defect 2, 616780 (3)
VCL Cardiomyopathy, dilated, 1W, 611407 (3)
Cardiomyopathy, hypertrophic, 15, 613255 (3)
WDR11 Hypogonadotropic hypogonadism 14 with or without anosmia, 614858 (3)
ZFYVE27 Spastic paraplegia 33, autosomal dominant, 610244 (3)
ZNF365 {Nephrolithiasis, uric acid, susceptibility to}, 605990 (3)

Genes at Clinical Genomics Database

ABCC2, ADRB1, ALOX5, ARMC4, BAG3, BICC1, BMPR1A, BMS1, CACNB2, CDH23, CDHR1, CHAT, CNNM2, COL13A1, COL17A1, CUBN, CWF19L1, CYP17A1, CYP26C1, CYP2C8, DCLRE1C, DHTKD1, DNA2, ECHS1, EGR2, ERCC6, ERLIN1, FAS, FGFR2, HABP2, HELLS, HK1, HPS1, HPSE2, IPMK, ITGA8, LGI1, LIPA, LIPN, MASTL, MAT1A, MBL2, MYO3A, MYPN, NEUROG3, NFKB2, NODAL, NT5C2, OPTN, PCDH15, PDE6C, PLAU, PLCE1, PRF1, RBM20, RBP3, RET, SFTPA2, SFXN4, SLC29A3, SMC3, TCTN3, TUBB8, VCL, WDR11, ZFYVE27,
ABCC2 Dubin-Johnson syndrome
ADRB1 Beta-blocker response, association with
ALOX5 Asthma, diminished response to antileukotriene treatment in
ARMC4 Ciliary dyskinesia, primary, 23
BAG3 Cardiomyopathy, dilated, 1HH
Myopathy, myofibrillar 6
BICC1 Renal dysplasia, cystic, susceptibility to
BMPR1A Polyposis syndrome, hereditary mixed, 2
Polyposis, juvenile intestinal
BMS1 Aplasia cutis congenita, nonsyndromic
CACNB2 Brugada syndrome 4
CDH23 Deafness, autosomal recessive 12
Usher syndrome, type 1D
Usher syndrome, type 1D /F digenic
CDHR1 Cone-rod dystrophy 15
Retinitis pigmentosa 65
CHAT Myasthenic syndrome, congenital 6, presynaptic
CNNM2 Hypomagnesemia 6 ,renal
COL13A1 Myasthenic syndrome, congenital, 19
COL17A1 Epithelial recurrent erosion dystrophy (ERED)
Epidermolysis bullosa, junctional, non-Herlitz type
CUBN Megaloblastic anemia-1, Finnish type
CWF19L1 Spinocerebellar ataxia, autosomal recessive 17
CYP17A1 Adrenal hyperplasia, congenital, due to 17-alpha-hydroxylase deficiency
CYP26C1 Focal facial dermal dysplasia 4
CYP2C8 Rhabdomyolysis, cerivastatin-induced
DCLRE1C Omenn syndrome
Severe combined immunodeficiency with sensitivity to ionizing radiation
DHTKD1 Charcot-Marie-Tooth disease, type 2Q
2-aminoadipic and 2-oxoadipic aciduria
DNA2 Progressive external ophthalmoplegia with mitochondrial deletions, autosomal dominant, 6
Seckel syndrome 8
ECHS1 Mitochondrial short-chain enoyl-CoA hydratase 1 deficiency
EGR2 Charcot-Marie-Tooth disease, demyelinating, type 1D
Neuropathy, congenital hypomyelinating, 1
Dejerine-Sottas disease
ERCC6 Xeroderma Pigmentosum-Cockayne Syndrome
De Sanctis-Cacchione syndrome
Premature ovarian failure 11 (AD)
ERLIN1 Spastic paraplegia 62, autosomal recessive
FAS Autoimmune lymphoproliferative syndrome, type IA
FGFR2 Lacrimoauriculodentodigital syndrome
Antley-Bixler syndrome without genital anomalies or disordered steroidogenesis
Sraniofacial-skeletal-dermatological dysplasia
Crouzon syndrome
Jackson-Weiss syndrome
Pfeiffer syndrome
Apert syndrome
Beare-Stevenson cutis gyrata syndrome
HABP2 Thyroid cancer, nonmedullary 5
HELLS Immunodeficiency-centromeric instability-facial anomalies syndrome 4
HK1 Hemolytic anemia, nonspherocytic, due to hexokinase deficiency
HPS1 Hermansky-Pudlak syndrome 1
HPSE2 Ochoa syndrome
Urofacial syndrome 1
IPMK Small intestinal carcinoid, hereditary
ITGA8 Renal agenesis, bilateral
LGI1 Epilepsy, familial temporal lobe, 1
LIPA Cholesterol ester storage disease
Wolman disease
LIPN Ichthyosis, congenital, autosomal recessive 8
MASTL Thrombocytopenia 2
MAT1A Methionine adenosyltransferase deficiency
MBL2 Mannose-binding protein deficiency
MYO3A Deafness, autosomal recessive 30
MYPN Cardiomyopathy, dilated, 1KK
Cardiomyopathy, familial hypertrophic, 22
Cardiomyopathy, familial restrictive, 4
NEUROG3 Diarrhea 4, malabsorptive, congenital
NFKB2 Immunodeficiency, common variable, 10
NODAL Heterotaxy, visceral, 5
NT5C2 Spastic paraplegia 45
OPTN Glaucoma, normal tension, susceptibility to
Glaucoma 1, open angle, E
PCDH15 Deafness, autosomal recessive 23
Usher syndrome, type 1F
Usher syndrome, type 1D/F, digenic
PDE6C Cone dystrophy 4
PLAU Quebec platelet disorder
PLCE1 Nephrotic syndrome, type 3
PRF1 Hemophagocytic lymphohistiocytosis, familial, 2
Lymphoma, non-Hodgkin
Aplastic anemia, adult-onset
RBM20 Cardiomyopathy, dilated, 1DD
RBP3 Retinitis pigmentosa 66
RET Central hypoventilation syndrome, congenital
Multiple endocrine neoplasia, type IIA
Multiple endocrine neoplasia IIB
Medullary thyroid carcinoma, familial
Pheochromocytoma
Hirschsprung disease, susceptibility to 1
SFTPA2 Pulmonary fibrosis, idiopathic
SFXN4 Combined oxidative phosphorylation deficiency 18
SLC29A3 Histiocytosis-lymphadenopathy plus syndrome
SMC3 Cornelia de Lange syndrome 3
TCTN3 Joubert syndrome 18
Orofaciodigital syndrome IV (Mohr-Majewski syndrome)
TUBB8 Oocyte maturation defect 2
VCL Cardiomyopathy, familial hypertrophic 15
Cardiomyopathy, dilated, 1W
WDR11 Hypogonadotropic hypogonadism
Kallmann syndrome
ZFYVE27 Spastic paraplegia 33, autosomal dominant

Genes at HGMD

Summary

Number of Variants: 1394
Number of Genes: 325

Export to: CSV
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs807022
dbSNP Clinvar
102770327 102.887 A G PASS 0/1 53 None None None 0.77616 0.77620 None None None None None None PDZD7|0.166478765|40.77%

SEMA4G

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs11591349
dbSNP Clinvar
102744331 105.648 A T PASS 0/1 40 None None None 0.25559 0.25560 0.10 0.12 None None None None None None MRPL43|0.129764322|45.91%,SEMA4G|0.160774225|41.43%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs368424785
dbSNP Clinvar
102247753 106.441 A G PASS 0/1 33 None None None 0.00020 0.00020 0.00008 None None None None None None SEC31B|0.238135717|32.57%

SCD

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2234970
dbSNP Clinvar
102116311 121.581 A C PASS 0/1 63 NON_SYNONYMOUS_CODING MODERATE None 0.38898 0.38900 0.39959 1.00 0.00 None None None None None None SCD|0.166983144|40.66%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3818539
dbSNP Clinvar
97174164 191.654 A G PASS 0/1 81 None None None 0.19768 0.19770 None None None None None None SORBS1|0.560625158|13.33%

SORBS1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs943542
dbSNP Clinvar
97192324 295.49 A G PASS 1/1 32 NON_SYNONYMOUS_CODING MODERATE None 0.98083 0.98080 0.01984 1.00 0.00 None None None None None None SORBS1|0.560625158|13.33%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2278841
dbSNP Clinvar
102056970 97.3624 A G PASS 0/1 49 None None None 0.41534 0.41530 0.07604 None None None None None None PKD2L1|0.163925898|41.03%

TCTN3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10786229
dbSNP Clinvar
97447373 155.138 A T PASS 0/1 67 SYNONYMOUS_CODING LOW None 0.42472 0.42470 0.35176 None None None None None None TCTN3|0.031987245|68.63%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs986266
dbSNP Clinvar
101980459 246.384 A G PASS 1/1 27 None None None 0.97684 0.97680 0.02471 None None None None None None CHUK|0.906139111|3.32%

ABLIM1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2247528
dbSNP Clinvar
116307504 388.509 A G PASS 0/1 132 SYNONYMOUS_CODING LOW None 0.78315 0.78310 0.20821 None None None None None None ABLIM1|0.44358146|18.51%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs694883
dbSNP Clinvar
116075228 272.668 A G PASS 1/1 30 None None None 0.95527 0.95530 None None None None None None AFAP1L2|0.092781823|52.66%
View tsvc_variants_ionxpress_001 10 rs11597086
dbSNP Clinvar
101953705 33.1649 A C PASS 0/1 29 None None None 0.17193 0.17190 0.30624 None None None None None None CHUK|0.906139111|3.32%
View tsvc_variants_ionxpress_001 10 rs10883439
dbSNP Clinvar
101841153 173.724 A G PASS 1/1 19 None None None 0.89297 0.89300 0.09749 None None None None None None CPN1|0.070299253|57.42%

DNTT

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs6584066
dbSNP Clinvar
98078239 551.293 A G PASS 1/1 59 NON_SYNONYMOUS_CODING MODERATE None 0.99281 0.99280 0.00930 0.47 0.00 None None None None None None DNTT|0.963705326|1.87%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3750599
dbSNP Clinvar
100013244 59.9203 A C PASS 0/1 61 None None None 0.32248 0.32250 None None None None None None LOXL4|0.122377501|47.06%

R3HCC1L

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs1952061
dbSNP Clinvar
99991408 343.747 A G PASS 1/1 38 NON_SYNONYMOUS_CODING MODERATE None 0.99181 0.99180 0.00961 1.00 0.00 None None None None None None R3HCC1L|0.19921412|36.81%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3750612
dbSNP Clinvar
99517355 405.96 A G PASS 1/1 49 None None None 0.62540 0.62540 0.28671 None None None None None None ZFYVE27|0.220548654|34.37%
View tsvc_variants_ionxpress_001 10 rs12572329
dbSNP Clinvar
98113272 91.0428 A G PASS 0/1 26 None None None 0.25320 0.25320 0.13776 None None None None None None OPALIN|0.011841887|79.34%

ANKRD2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs12221474
dbSNP Clinvar
99332488 60.0022 A C PASS 0/1 23 SYNONYMOUS_CODING LOW None 0.35344 0.35340 0.24835 None None None None None None ANKRD2|0.135833884|44.99%

ARHGAP19

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2253301
dbSNP Clinvar
99019177 357.447 A G PASS 1/1 39 SYNONYMOUS_CODING LOW None 0.84445 0.84440 0.10049 None None None None None None ARHGAP19-SLIT1|0.508518585|15.45%,ARHGAP19|0.371362941|22.63%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2297666
dbSNP Clinvar
99205686 246.591 A G PASS 0/1 119 None None None 0.24281 0.24280 0.23597 None None None None None None EXOSC1|0.6160776|11.25%

RRP12

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2275091
dbSNP Clinvar
99160965 855.59 A G PASS 1/1 98 SYNONYMOUS_CODING LOW None 0.92692 0.92690 0.05028 None None None None None None RRP12|0.177139919|39.41%

PIK3AP1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3748236
dbSNP Clinvar
98369536 580.094 A G PASS 1/1 63 SYNONYMOUS_CODING LOW None 0.26797 0.26800 0.24835 None None None None None None PIK3AP1|0.137689668|44.76%

RRP12

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs1048442
dbSNP Clinvar
99160152 216.3 A G PASS 0/1 100 SYNONYMOUS_CODING LOW None 0.40056 0.40060 0.37767 None None None None None None RRP12|0.177139919|39.41%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2275090
dbSNP Clinvar
99148151 133.05 A G PASS 0/1 65 None None None 0.40415 0.40420 0.37798 None None None None None None RRP12|0.177139919|39.41%

RRP12

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2275089
dbSNP Clinvar
99141205 97.3393 A G PASS 0/1 55 SYNONYMOUS_CODING LOW None 0.40475 0.40480 0.37783 None None None None None None RRP12|0.177139919|39.41%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs581327
dbSNP Clinvar
116068176 108.658 A G PASS 0/1 65 None None None 0.90435 0.90440 0.10188 None None None None None None AFAP1L2|0.092781823|52.66%
View tsvc_variants_ionxpress_001 10 rs3737194
dbSNP Clinvar
99130127 59.1313 A G PASS 0/1 35 None None None 0.46546 0.46550 None None None None None None RRP12|0.177139919|39.41%
View tsvc_variants_ionxpress_001 10 rs912483
dbSNP Clinvar
98408714 771.456 A G PASS 1/1 101 None None None 0.97804 0.97800 None None None None None None PIK3AP1|0.137689668|44.76%

LIPJ

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs1409136
dbSNP Clinvar
90356598 395.311 A G PASS 1/1 46 NON_SYNONYMOUS_CODING MODERATE None 0.89257 0.89260 0.21041 0.47 0.01 None None None None None None LIPJ|0.007486151|83.09%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10749217
dbSNP Clinvar
118231406 25.7414 A C PASS 0/1 40 None None None 0.75060 0.75060 0.24881 None None None None None None PNLIPRP3|0.006971141|83.54%

PLEKHS1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10885500
dbSNP Clinvar
115526177 60.8362 A G PASS 0/1 42 SYNONYMOUS_CODING LOW None 0.23323 0.23320 0.29692 None None None None None None PLEKHS1|0.008800242|81.86%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs793528
dbSNP Clinvar
99003613 1077.88 A C PASS 1/1 116 None None None 0.93770 0.93770 None None None None None None ARHGAP19-SLIT1|0.508518585|15.45%,ARHGAP19|0.371362941|22.63%

NRAP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3127122
dbSNP Clinvar
115422474 77.5715 A G PASS 0/1 41 SYNONYMOUS_CODING LOW None 0.28914 0.28910 0.32846 None None None None None None NRAP|0.252539154|31.32%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2297987
dbSNP Clinvar
98989454 478.526 A G PASS 1/1 51 None None None 0.58247 0.58250 None None None None None None ARHGAP19-SLIT1|0.508518585|15.45%,ARHGAP19|0.371362941|22.63%

LIPF

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs814628
dbSNP Clinvar
90429652 54.0658 A G PASS 0/1 29 NON_SYNONYMOUS_CODING MODERATE None 0.16793 0.16790 0.13140 0.00 0.92 None None None None None None LIPF|0.008432404|82.22%
View tsvc_variants_ionxpress_001 10 rs1228187
dbSNP Clinvar
90438207 66.0399 A G PASS 0/1 32 SYNONYMOUS_CODING LOW None 0.22844 0.22840 0.18415 None None None None None None LIPF|0.008432404|82.22%

NRAP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3737322
dbSNP Clinvar
115412793 539.376 A G PASS 1/1 58 SYNONYMOUS_CODING LOW None 0.30811 0.30810 0.33521 None None None None None None NRAP|0.252539154|31.32%
View tsvc_variants_ionxpress_001 10 rs2154028
dbSNP Clinvar
115411614 1015.29 A G PASS 1/1 109 NON_SYNONYMOUS_CODING MODERATE None 0.87760 0.87760 0.13109 1.00 0.00 None None None None None None NRAP|0.252539154|31.32%

PFKP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs4881080
dbSNP Clinvar
3143643 771.393 A C PASS 1/1 83 PROTEIN_STRUCTURAL_INTERACTION_LOCUS HIGH None 0.00100 0.99860 0.00039 None None None None None None PFKP|0.031194886|68.91%

PNLIPRP3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs1897519
dbSNP Clinvar
118231363 361.339 A G PASS 1/1 40 NON_SYNONYMOUS_CODING MODERATE None 0.96845 0.96850 0.03683 1.00 0.00 None None None None None None PNLIPRP3|0.006971141|83.54%

ENO4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs11197835
dbSNP Clinvar
118620459 407.578 A C PASS 1/1 43 SYNONYMOUS_CODING LOW None 0.23962 0.23960 None None None None None None ENO4|0.087748585|53.69%

NRAP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3121453
dbSNP Clinvar
115374670 106.013 A G PASS 0/1 47 SYNONYMOUS_CODING LOW None 0.12480 0.12480 0.20329 None None None None None None NRAP|0.252539154|31.32%

TUBB8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs41288743
dbSNP Clinvar
93714 40.1434 A C PASS 0/1 38 SYNONYMOUS_CODING LOW None None None None None None None TUBB8|0.002707074|89.22%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10903967
dbSNP Clinvar
3149402 110.798 A G PASS 0/1 64 None None None 0.59545 0.59540 0.43892 None None None None None None PFKP|0.031194886|68.91%
View tsvc_variants_ionxpress_001 10 rs2306304
dbSNP Clinvar
3154534 48.4801 A G PASS 0/1 32 None None None 0.44669 0.44670 None None None None None None PFKP|0.031194886|68.91%

PFKP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs1052309
dbSNP Clinvar
3155620 495.089 A G PASS 1/1 53 SYNONYMOUS_CODING LOW None 0.60623 0.60620 0.43326 None None None None None None PFKP|0.031194886|68.91%

ITIH5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2275068
dbSNP Clinvar
7618501 66.2634 A G PASS 0/1 56 SYNONYMOUS_CODING LOW None 0.53115 0.53120 0.49308 None None None None None None ITIH5|0.026992759|70.89%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs4072196
dbSNP Clinvar
125780460 1039.47 A G PASS 1/1 110 None None None 0.89577 0.89580 None None None None None None CHST15|0.068665566|57.81%

PITRM1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs373711451
dbSNP Clinvar
3207636 43.0917 A G PASS 0/1 31 NON_SYNONYMOUS_CODING MODERATE None 0.00008 0.01 0.99 None None None None None None PITRM1|0.017462354|75.61%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2255740
dbSNP Clinvar
114181683 612.483 A G PASS 1/1 69 None None None 0.94469 0.94470 0.07820 None None None None None None ACSL5|0.090893632|53.06%
View tsvc_variants_ionxpress_001 10 rs2301179
dbSNP Clinvar
118404620 674.657 A G PASS 1/1 71 None None None 0.47085 0.47080 0.45889 None None None None None None PNLIPRP2|0.021607761|73.38%

PDCD4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs7081726
dbSNP Clinvar
112641053 490.841 A G PASS 1/1 52 NON_SYNONYMOUS_CODING MODERATE None 0.91853 0.91850 0.07973 0.66 0.00 None None None None None None PDCD4|0.925395579|2.86%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs41386650
dbSNP Clinvar
118084468 303.018 A G PASS 1/1 30 None None None 0.15256 0.15260 0.10732 None None None None None None CCDC172|0.160807356|41.42%

SMC3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2419565
dbSNP Clinvar
112361870 284.474 A G PASS 1/1 36 SYNONYMOUS_CODING LOW None 0.98682 0.98680 0.01015 None None None None None None SMC3|0.940083987|2.48%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs11195213
dbSNP Clinvar
112360936 51.5701 A G PASS 0/1 35 None None None 0.14896 0.14900 0.09757 None None None None None None SMC3|0.940083987|2.48%

AKR1C4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs17306779
dbSNP Clinvar
5242164 335.776 A G PASS 1/1 36 SYNONYMOUS_CODING LOW None 0.16514 0.16510 0.18853 None None None None None None AKR1C4|0.002829069|88.97%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs623980
dbSNP Clinvar
111646147 222.313 A G PASS 1/1 24 None None None 0.36522 0.36520 0.46855 None None None None None None XPNPEP1|0.528337745|14.64%

GSTO2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs156697
dbSNP Clinvar
106039185 354.901 A G PASS 0/1 130 NON_SYNONYMOUS_CODING MODERATE None 0.44070 0.44070 0.47686 0.62 0.00 None None None None None None GSTO2|0.20461421|36.16%

AKR1C4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs4880718
dbSNP Clinvar
5255025 758.779 A G PASS 1/1 96 NON_SYNONYMOUS_CODING MODERATE None 0.99980 0.99980 1.00 0.00 None None None None None None AKR1C4|0.002829069|88.97%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2398157
dbSNP Clinvar
5260812 281.046 A G PASS 1/1 33 None None None 0.96985 0.96980 None None None None None None AKR1C4|0.002829069|88.97%

UCN3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10904481
dbSNP Clinvar
5415954 67.1717 A G PASS 0/1 35 NON_SYNONYMOUS_CODING MODERATE None 0.44589 0.44590 0.31018 1.00 0.00 None None None None None None UCN3|0.017619353|75.53%

SFR1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10786783
dbSNP Clinvar
105882765 245.076 A G PASS 0/1 94 NON_SYNONYMOUS_CODING MODERATE None 0.23522 0.23520 0.22051 0.07 0.08 None None None None None None SFR1|0.027721504|70.54%

TUBAL3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs7910290
dbSNP Clinvar
5436260 148.948 A G PASS 0/1 72 SYNONYMOUS_CODING LOW None 0.77915 0.77920 0.27949 None None None None None None TUBAL3|0.010906272|80.16%
View tsvc_variants_ionxpress_001 10 rs11253156
dbSNP Clinvar
5437365 147.317 A G PASS 0/1 113 SYNONYMOUS_CODING LOW None 0.78974 0.78970 0.27041 None None None None None None TUBAL3|0.010906272|80.16%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs7901021
dbSNP Clinvar
105882055 217.846 A C PASS 0/1 56 None None None 0.23163 0.23160 None None None None None None SFR1|0.027721504|70.54%

ATRNL1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10885721
dbSNP Clinvar
117228794 71.9528 A G PASS 0/1 48 SYNONYMOUS_CODING LOW None 0.34445 0.34440 0.45552 None None None None None None ATRNL1|0.785284373|6.21%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs11253185
dbSNP Clinvar
5495157 287.379 A G PASS 0/1 103 None None None 0.20907 0.20910 None None None None None None NET1|0.100975658|50.99%

COL17A1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2476958
dbSNP Clinvar
105796819 949.679 A G PASS 1/1 104 SYNONYMOUS_CODING LOW None 0.98602 0.98600 0.01377 None None None None None None COL17A1|0.220252717|34.39%

TUBB8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs61839058
dbSNP Clinvar
93994 32.9118 A G PASS 0/1 55 NON_SYNONYMOUS_CODING MODERATE None 0.01 0.10 None None None None None None TUBB8|0.002707074|89.22%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs805714
dbSNP Clinvar
105796738 722.727 A C PASS 1/1 76 None None None 0.98602 0.98600 0.01424 None None None None None None COL17A1|0.220252717|34.39%
View tsvc_variants_ionxpress_001 10 rs2420069
dbSNP Clinvar
116605103 99.6769 A G PASS 0/1 50 None None None 0.35324 0.35320 0.42434 None None None None None None FAM160B1|0.218983196|34.48%

NKX6-2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2804003
dbSNP Clinvar
134598628 283.863 A G PASS 1/1 31 NON_SYNONYMOUS_CODING MODERATE None 0.97524 0.97520 0.04415 1.00 0.00 None None None None None None NKX6-2|0.087759908|53.68%

CALHM1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2986017
dbSNP Clinvar
105218252 1205.81 A G PASS 1/1 130 NON_SYNONYMOUS_CODING MODERATE None 0.87201 0.87200 0.20363 0.44 0.00 None None None None None None CALHM1|0.140063286|44.38%

PLCE1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2274223
dbSNP Clinvar
96066341 820.092 A G PASS 1/1 87 NON_SYNONYMOUS_CODING MODERATE None 0.29852 0.29850 0.31859 1.00 0.00 None None None None None None PLCE1|0.494563686|16.1%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2986016
dbSNP Clinvar
105215016 328.87 A G PASS 1/1 36 None None None 0.88019 0.88020 0.19011 None None None None None None CALHM1|0.140063286|44.38%
View tsvc_variants_ionxpress_001 10 rs11187850
dbSNP Clinvar
96068480 530.695 A G PASS 1/1 58 None None None 0.23642 0.23640 0.27463 None None None None None None PLCE1|0.494563686|16.1%

PNLIPRP2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10885997
dbSNP Clinvar
118397971 73.9298 A G PASS 0/1 36 NON_SYNONYMOUS_CODING MODERATE None 0.30591 0.30590 0.34180 None None None None None None PNLIPRP2|0.021607761|73.38%
View tsvc_variants_ionxpress_001 10 rs4751996
dbSNP Clinvar
118397894 297.123 A G PASS 1/1 31 SYNONYMOUS_CODING LOW None 0.47844 0.47840 0.44533 1.00 0.00 None None None None None None PNLIPRP2|0.021607761|73.38%

HELLS

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs11188019
dbSNP Clinvar
96313960 362.129 A C PASS 1/1 39 SYNONYMOUS_CODING LOW None 0.53055 0.53060 0.45471 None None None None None None HELLS|0.461421805|17.62%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs12220588
dbSNP Clinvar
96341336 306.925 A C PASS 1/1 42 None None None 0.43790 0.43790 None None None None None None HELLS|0.461421805|17.62%
View tsvc_variants_ionxpress_001 10 rs2275620
dbSNP Clinvar
96802598 116.031 A T PASS 0/1 69 None None None 0.59784 0.59780 0.32739 None None None None None None CYP2C8|0.004045398|86.94%

PCGF6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs113359610,rs60968810
dbSNP Clinvar
105110740 23.597 A AG... PASS 0/1 28 CODON_CHANGE_PLUS_CODON_INSERTION MODERATE None 0.44649 0.44650 0.31420 None None None None None None PCGF6|0.176496571|39.45%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs61869211
dbSNP Clinvar
104449836 42.326 A G PASS 0/1 52 None None None 0.18770 0.18770 None None None None None None ARL3|0.573752246|12.86%

C10orf129

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs591157
dbSNP Clinvar
96954298 99.5896 A G PASS 0/1 35 NON_SYNONYMOUS_CODING MODERATE None 0.38998 0.39000 0.45642 0.63 0.00 None None None None None None ACSM6|0.00147864|92.86%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 . 116596071 72.1003 A T PASS 0/1 20 None None None None None None None None None FAM160B1|0.218983196|34.48%

TMEM180

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs11191295
dbSNP Clinvar
104231054 138.875 A G PASS 0/1 94 SYNONYMOUS_CODING LOW None 0.41014 0.41010 0.49470 None None None None None None TMEM180|0.184381022|38.41%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs1049989
dbSNP Clinvar
96997479 40.3134 A C PASS 0/1 20 None None None 0.49401 0.49400 None None None None None None PDLIM1|0.472918408|17.05%

PNLIPRP2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs4751995
dbSNP Clinvar
118397884 261.946 A G PASS 1/1 29 NON_SYNONYMOUS_CODING MODERATE None 0.47844 0.47840 0.44660 0.00 None None None None None None PNLIPRP2|0.021607761|73.38%

NFKB2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs4919634
dbSNP Clinvar
104160434 607.397 A G PASS 1/1 65 SYNONYMOUS_CODING LOW None 0.98682 0.98680 0.01052 None None None None None None NFKB2|0.301381383|27.56%

DIP2C

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3740304
dbSNP Clinvar
323283 105.346 A G PASS 0/1 55 SYNONYMOUS_CODING LOW None 0.28415 0.28410 0.26449 None None None None None None DIP2C|0.162764549|41.18%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2303991
dbSNP Clinvar
329487 143.285 A G PASS 0/1 84 None None None 0.14117 0.14120 None None None None None None DIP2C|0.162764549|41.18%
View tsvc_variants_ionxpress_001 10 rs45604937
dbSNP Clinvar
118327175 70.2752 A G PASS 0/1 49 None None None 0.07468 0.07468 None None None None None None PNLIP|0.047092558|63.55%

NFKB2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs4919633
dbSNP Clinvar
104159196 2355.2 A G PASS 1/1 256 SYNONYMOUS_CODING LOW None 0.98682 0.98680 0.00815 None None None None None None NFKB2|0.301381383|27.56%

SPAG6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs7074847
dbSNP Clinvar
22675857 94.6497 A G PASS 0/1 73 NON_SYNONYMOUS_CODING MODERATE None 0.18451 0.18450 0.18307 0.65 0.00 None None None None None None SPAG6|0.144291349|43.84%

CCDC3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs10906249
dbSNP Clinvar
12940455 178.374 A G PASS 1/1 20 SYNONYMOUS_CODING LOW None 0.99141 0.99140 0.00884 None None None None None None CCDC3|0.140056392|44.39%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs7090944
dbSNP Clinvar
13206233 328.158 A T PASS 1/1 32 None None None 0.79693 0.79690 0.25173 None None None None None None MCM10|0.033062019|68.13%
View tsvc_variants_ionxpress_001 10 rs2277226
dbSNP Clinvar
7769604 1038.87 A G PASS 1/1 111 None None None 0.73163 0.73160 None None None None None None ITIH2|0.042305273|65.01%

MCM10

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs2274110
dbSNP Clinvar
13239651 463.362 A G PASS 1/1 53 NON_SYNONYMOUS_CODING MODERATE None 0.10923 0.10920 0.13655 0.03 0.85 None None None None None None MCM10|0.033062019|68.13%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View tsvc_variants_ionxpress_001 10 rs3127792
dbSNP Clinvar
46969496 105.412 A G PASS 0/1 159 None None None None None None None None None SYT15|0.013118244|78.44%