+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

+ Genes 1

Genes:
MUC22,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 20
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

MUC22
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs12526820
dbSNP Clinvar 		30995786 2963.77 A G PASS 0/1 272 NON_SYNONYMOUS_CODING MODERATE None 0.12640 0.12640 0.08 0.00 -1.02 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 30996487 2667.73 GA... GA... PASS 0/1 185 CODON_DELETION MODERATE None None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs9262549
dbSNP Clinvar 		30997692 2982.77 G C PASS 0/1 201 NON_SYNONYMOUS_CODING MODERATE None 0.80851 0.80850 1.00 0.00 -0.86 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs12110470
dbSNP Clinvar 		30997816 2227.77 G T PASS 0/1 147 SYNONYMOUS_CODING LOW None 0.28295 0.28290 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs10947121
dbSNP Clinvar 		30999997 1089.77 T C PASS 0/1 76 NON_SYNONYMOUS_CODING MODERATE None 0.45308 0.45310 1.00 0.00 -0.41 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs3869098
dbSNP Clinvar 		31002452 908.77 A G PASS 0/1 64 NON_SYNONYMOUS_CODING MODERATE None 0.56849 0.56850 1.00 0.00 -0.27 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs77387993
dbSNP Clinvar 		30994730 2174.77 G A PASS 0/1 152 NON_SYNONYMOUS_CODING MODERATE None 0.08107 0.08107 0.51 0.00 -0.21 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs4248153
dbSNP Clinvar 		31002527 2598.77 A G PASS 0/1 143 NON_SYNONYMOUS_CODING MODERATE None 0.49820 0.49820 1.00 0.00 -0.40 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs6928386
dbSNP Clinvar 		30994412 2774.77 G A PASS 0/1 206 NON_SYNONYMOUS_CODING MODERATE None 0.13399 0.13400 0.19 0.00 -0.91 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1419664
dbSNP Clinvar 		30993313 1113.77 C T PASS 0/1 89 SYNONYMOUS_CODING LOW None 0.12061 0.12060 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs3094672
dbSNP Clinvar 		30993377 1574.77 T A PASS 0/1 121 NON_SYNONYMOUS_CODING MODERATE None 0.79593 0.79590 1.00 0.00 -0.54 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs138701007
dbSNP Clinvar 		30993494 2513.77 G C PASS 0/1 123 NON_SYNONYMOUS_CODING MODERATE None 0.01398 0.01398 0.15 0.00 0.02 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs76100089
dbSNP Clinvar 		30994635 2275.77 C T PASS 0/1 136 NON_SYNONYMOUS_CODING MODERATE None 0.08087 0.08087 0.01 0.00 0.45 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs2517554
dbSNP Clinvar 		30993499 2605.77 C T PASS 0/1 135 SYNONYMOUS_CODING LOW None 0.48802 0.48800 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs4713420
dbSNP Clinvar 		30993567 1359.77 G T PASS 0/1 100 NON_SYNONYMOUS_CODING MODERATE None 0.21266 0.21270 0.23 0.00 -0.70 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs12179536
dbSNP Clinvar 		30993590 1419.77 A G PASS 0/1 86 NON_SYNONYMOUS_CODING MODERATE None 0.19549 0.19550 1.00 0.00 -0.85 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs2523897
dbSNP Clinvar 		30993958 1963.77 A G PASS 0/1 145 SYNONYMOUS_CODING LOW None 0.81729 0.81730 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs72847018
dbSNP Clinvar 		30994052 2357.77 A T PASS 0/1 140 NON_SYNONYMOUS_CODING MODERATE None 0.04014 0.04014 0.11 0.00 -1.30 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs28360987
dbSNP Clinvar 		30994253 2702.77 G A PASS 0/1 182 NON_SYNONYMOUS_CODING MODERATE None 0.16334 0.16330 0.30 0.00 -0.92 None None None None None None MUC22|0.000197145|99.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs75683091
dbSNP Clinvar 		30996314 2160.77 A G PASS 0/1 270 NON_SYNONYMOUS_CODING MODERATE None 0.07688 0.07688 1.00 0.00 -1.89 None None None None None None MUC22|0.000197145|99.78%
  • Page 1 of 1