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+ Genes 1

Genes:
HLA-DQB1,

+ Genes associated with diseases 1

Genes at Omim

HLA-DQB1,
HLA-DQB1 {Celiac disease, susceptibility to}, 212750 (3)
{Creutzfeldt-Jakob disease, variant, resistance to}, 123400 (3)
{Multiple sclerosis, susceptibility to, 1}, 126200 (3)

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 34
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

HLA-DQB1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1140322
dbSNP Clinvar 		32632578 174.77 T G PASS 0/1 70 SYNONYMOUS_CODING LOW None 0.43570 0.43570 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049086
dbSNP Clinvar 		32629904 2211.77 A G PASS 1/1 65 SYNONYMOUS_CODING LOW None 0.62580 0.62580 0.44490 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1140347
dbSNP Clinvar 		32628022 641.77 A G PASS 0/1 41 SYNONYMOUS_CODING LOW None None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1130410
dbSNP Clinvar 		32629170 281.77 C G PASS 0/1 14 SYNONYMOUS_CODING LOW None 0.07768 0.07768 0.03167 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049163
dbSNP Clinvar 		32629193 634.56 C T PASS 1/1 24 NON_SYNONYMOUS_CODING MODERATE None 0.37360 0.37360 0.57 0.01 -0.97 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1130429
dbSNP Clinvar 		32629210 237.18 C T PASS 0/1 33 NON_SYNONYMOUS_CODING MODERATE None 0.04393 0.04393 0.00126 0.14 0.01 2.43 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1130398
dbSNP Clinvar 		32629764 666.77 C T PASS 0/1 88 NON_SYNONYMOUS_CODING MODERATE None 0.39557 0.39560 0.33844 0.04 0.00 2.19 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049092
dbSNP Clinvar 		32629802 4662.77 A G PASS 1/1 103 SYNONYMOUS_CODING LOW None 0.62021 0.62020 0.43333 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs701564
dbSNP Clinvar 		32629809 4837.77 C T PASS 1/1 111 NON_SYNONYMOUS_CODING MODERATE None 0.24082 0.24080 0.19056 0.13 0.01 0.38 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049133
dbSNP Clinvar 		32629847 3302.77 A G PASS 1/1 92 SYNONYMOUS_CODING LOW None 0.83127 0.83130 0.26119 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049130
dbSNP Clinvar 		32629859 3259.77 A G PASS 1/1 91 SYNONYMOUS_CODING LOW None 0.66554 0.66550 0.47607 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049087
dbSNP Clinvar 		32629889 1408.77 G A PASS 0/1 64 SYNONYMOUS_CODING LOW None 0.45068 0.45070 0.37654 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1063323
dbSNP Clinvar 		32629891 508.77 C T PASS 0/1 69 NON_SYNONYMOUS_CODING MODERATE None 0.39517 0.39520 0.32958 0.09 0.01 -0.19 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1130380
dbSNP Clinvar 		32632694 699.77 C G PASS 0/1 57 NON_SYNONYMOUS_CODING MODERATE None 0.02 0.00 1.53 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs3204379
dbSNP Clinvar 		32632642 2218.77 C T PASS 0/1 82 SYNONYMOUS_CODING LOW None 0.07728 0.07728 0.00646 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1130386
dbSNP Clinvar 		32632650 3496.77 C T PASS 1/1 79 NON_SYNONYMOUS_CODING MODERATE None 0.54533 0.54530 0.46081 0.95 0.00 -0.38 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 32632659 1179.35 CT TG PASS 0/1 60 NON_SYNONYMOUS_CODING MODERATE None None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1140314
dbSNP Clinvar 		32632687 2653.77 A G PASS 1/1 68 SYNONYMOUS_CODING LOW None 0.42164 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1140313
dbSNP Clinvar 		32632700 819.77 T A PASS 0/1 62 NON_SYNONYMOUS_CODING MODERATE None 1.00 0.00 -0.76 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 32632714 1142.6 GCGG CC... PASS 1/2 45 SYNONYMOUS_CODING LOW None None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049083
dbSNP Clinvar 		32632724 717.77 C T PASS 0/1 56 NON_SYNONYMOUS_CODING MODERATE None 0.19429 0.19430 0.16334 0.00 0.10 3.37 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049082
dbSNP Clinvar 		32632744 735.77 C T PASS 0/1 56 SYNONYMOUS_CODING LOW None 0.37420 0.37420 0.32630 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 32632745 901.26 GCGTA ACGTC PASS 0/1 53 NON_SYNONYMOUS_CODING MODERATE None None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 32632781 1042.41 AG TA PASS 1/1 41 NON_SYNONYMOUS_CODING MODERATE None 0.59 0.00 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs3204373
dbSNP Clinvar 		32632801 633.77 G A PASS 0/1 25 SYNONYMOUS_CODING LOW None 0.06929 0.06929 0.00558 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1130375
dbSNP Clinvar 		32632820 910.77 C G PASS 1/1 20 NON_SYNONYMOUS_CODING MODERATE None 0.25959 0.25960 0.17146 0.82 0.00 -1.10 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs9274407
dbSNP Clinvar 		32632832 170.77 A T PASS 0/1 17 NON_SYNONYMOUS_CODING MODERATE None 0.75939 0.75940 0.21826 1.00 0.00 -2.60 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs12722107
dbSNP Clinvar 		32632833 404.77 A G PASS 0/1 16 NON_SYNONYMOUS_CODING MODERATE None 0.06969 0.06969 0.00551 0.38 0.00 -2.05 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs12722106
dbSNP Clinvar 		32634282 87.77 A G PASS 0/1 14 NON_SYNONYMOUS_CODING MODERATE None 0.06609 0.06609 0.00139 0.22 0.00 -0.40 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 32634300 379.49 GT... CT... PASS 1/1 15 NON_SYNONYMOUS_CODING MODERATE None None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049058
dbSNP Clinvar 		32634331 1163.29 G A,C PASS 1/2 32 SYNONYMOUS_CODING LOW None 0.37710 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 32634339 880.67 CTA GT... PASS 1/2 32 NON_SYNONYMOUS_CODING MODERATE None None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs1049057
dbSNP Clinvar 		32634350 1501.77 T C PASS 1/1 32 NON_SYNONYMOUS_CODING MODERATE None 0.60523 0.60520 0.42638 1.00 0.00 -1.23 None None None None None None HLA-DQB1|0.132406558|45.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs9274522
dbSNP Clinvar 		32634373 805.77 C T PASS 0/1 42 SYNONYMOUS_CODING LOW None 0.32368 0.32370 None None None None None None HLA-DQB1|0.132406558|45.55%
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