SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
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Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 13
Number of Genes: 1

Export to: CSV
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GPR115

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs115095434
dbSNP Clinvar
47675014 1219.77 C G PASS 0/1 91 None None None 0.00779 0.00779 0.00523 0.01 0.67 5.99 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs115500197
dbSNP Clinvar
47680146 1086.77 T C PASS 0/1 67 SYNONYMOUS_CODING LOW None 0.00779 0.00779 0.00523 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 47680256 453.83 CA TG PASS 0/1 47 NON_SYNONYMOUS_CODING MODERATE None 0.04 0.26 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs114630843
dbSNP Clinvar
47681925 988.77 A G PASS 0/1 70 NON_SYNONYMOUS_CODING MODERATE None 0.00779 0.00779 0.00515 0.35 0.00 -3.21 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs115211236
dbSNP Clinvar
47682135 1211.77 T C PASS 0/1 102 NON_SYNONYMOUS_CODING MODERATE None 0.00779 0.00779 0.00531 1.00 0.00 -2.10 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs79395681
dbSNP Clinvar
47682158 1351.77 T C PASS 0/1 102 NON_SYNONYMOUS_CODING MODERATE None 0.00779 0.00779 0.00523 1.00 0.00 -0.76 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs115186798
dbSNP Clinvar
47682259 1441.77 G A PASS 0/1 104 SYNONYMOUS_CODING LOW None 0.00779 0.00779 0.00523 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs9369738
dbSNP Clinvar
47682604 5015.77 A C PASS 1/1 139 NON_SYNONYMOUS_CODING MODERATE None 0.82448 0.82450 0.17623 0.70 0.15 -1.39 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 47682671 883.0 ATC GTT PASS 0/1 88 NON_SYNONYMOUS_CODING MODERATE None 0.98 0.01 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 . 47682679 1117.47 GTTC ATTG PASS 0/1 98 NON_SYNONYMOUS_CODING MODERATE None None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs114471615
dbSNP Clinvar
47684573 1221.77 T C PASS 0/1 73 NON_SYNONYMOUS_CODING MODERATE None 0.00779 0.00779 0.00523 0.01 0.35 3.27 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs116575459
dbSNP Clinvar
47685075 957.77 G C PASS 0/1 68 SYNONYMOUS_CODING LOW None 0.00779 0.00779 0.00523 None None None None None None ADGRF4|0.027234191|70.78%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 6 rs115896656
dbSNP Clinvar
47686153 661.77 C G PASS 0/1 34 NON_SYNONYMOUS_CODING MODERATE None 0.00779 0.00779 0.00523 0.01 1.00 5.14 None None None None None None ADGRF4|0.027234191|70.78%
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