SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 15
Number of Genes: 1

Export to: CSV
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WDFY4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs41282009
dbSNP Clinvar
49998780 1335.77 G A PASS 0/1 71 NON_SYNONYMOUS_CODING MODERATE None 0.11681 0.11680 0.03285 0.04 0.09 3.53 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs10857644
dbSNP Clinvar
49998824 1712.77 C T PASS 0/1 113 SYNONYMOUS_CODING LOW None 0.16953 0.16950 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs41282011
dbSNP Clinvar
50004372 862.77 C T PASS 0/1 76 SYNONYMOUS_CODING LOW None 0.11741 0.11740 0.03263 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs2170132
dbSNP Clinvar
50013402 2813.77 T C PASS 1/1 79 NON_SYNONYMOUS_CODING MODERATE None 0.57688 0.57690 0.43955 0.69 0.00 0.47 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs41283275
dbSNP Clinvar
50022040 1303.77 G A PASS 0/1 81 SYNONYMOUS_CODING LOW None 0.14956 0.14960 0.14455 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs7097397
dbSNP Clinvar
50025396 834.77 G A PASS 0/1 58 NON_SYNONYMOUS_CODING MODERATE None 0.35863 0.35860 0.31034 0.38 0.08 1.81 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs12268007
dbSNP Clinvar
50025446 1112.77 G T PASS 0/1 70 NON_SYNONYMOUS_CODING MODERATE None 0.16633 0.16630 0.16097 0.60 0.00 -0.40 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs6537579
dbSNP Clinvar
50034833 726.77 G A PASS 0/1 61 NON_SYNONYMOUS_CODING MODERATE None 0.20068 0.20070 0.18923 1.00 0.00 0.19 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs3747874
dbSNP Clinvar
50038800 3260.77 A G PASS 1/1 84 SYNONYMOUS_CODING LOW None 0.65016 0.65020 0.43057 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs12761517
dbSNP Clinvar
50040722 1620.77 C A PASS 0/1 109 SYNONYMOUS_CODING LOW None 0.08147 0.08147 0.11191 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs35423873
dbSNP Clinvar
50109895 1542.77 A C PASS 0/1 117 NON_SYNONYMOUS_CODING MODERATE None 0.12101 0.12100 0.13885 0.43 0.00 -0.69 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs2663046
dbSNP Clinvar
50109902 4710.77 G A PASS 1/1 122 NON_SYNONYMOUS_CODING MODERATE None 0.96965 0.96960 0.02541 1.00 0.00 -0.66 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs61733240
dbSNP Clinvar
50183042 2085.77 G A PASS 0/1 139 NON_SYNONYMOUS_CODING MODERATE None 0.11941 0.11940 0.11673 0.15 0.01 0.73 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs2271565
dbSNP Clinvar
50184949 1804.77 C T PASS 0/1 109 SYNONYMOUS_CODING LOW None 0.33427 0.33430 0.38371 None None None None None None WDFY4|0.061116122|59.55%
View 62388010_s7 mvar 62388010_S7.FREEBAYES 10 rs2292584
dbSNP Clinvar
50186415 2126.77 C T PASS 0/1 108 NON_SYNONYMOUS_CODING MODERATE None 0.00060 0.00060 0.45839 0.46 0.00 0.71 None None None None None None WDFY4|0.061116122|59.55%
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