SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 11
Number of Genes: 1

Export to: CSV
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CCDC110

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs7687202
dbSNP Clinvar
186379371 7547.93 G A Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 32 SYNONYMOUS_CODING LOW None 0.97744 0.97740 0.02553 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs146177065
dbSNP Clinvar
186379768 1279.55 A G Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only;VQSRTrancheSNP99.00to99.90 0/1 42 NON_SYNONYMOUS_CODING MODERATE None 0.00015 0.01 0.20 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs35596415
dbSNP Clinvar
186379899 6976.93 G C Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 44 NON_SYNONYMOUS_CODING MODERATE None 0.38439 0.38440 0.48545 1.00 0.01 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs59319722
dbSNP Clinvar
186380243 4390.93 A C Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 30 NON_SYNONYMOUS_CODING MODERATE None 0.38478 0.38480 0.48309 1.00 0.00 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs36007437
dbSNP Clinvar
186380295 695.34 A G Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only;VQSRTrancheSNP99.00to99.90 0/1 32 SYNONYMOUS_CODING LOW None 0.29493 0.29490 0.39827 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs11132306
dbSNP Clinvar
186380515 4243.93 G A Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 26 NON_SYNONYMOUS_CODING MODERATE None 0.38439 0.38440 0.48508 0.88 0.00 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs7698680
dbSNP Clinvar
186380846 8601.93 A T Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 30 NON_SYNONYMOUS_CODING MODERATE None 0.38558 0.38560 0.48685 0.64 0.03 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs7699687
dbSNP Clinvar
186381115 7431.93 G T Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 60 NON_SYNONYMOUS_CODING MODERATE None 0.38558 0.38560 0.48492 1.00 0.00 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs7699724
dbSNP Clinvar
186381165 7412.93 G A Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 50 SYNONYMOUS_CODING LOW None 0.38558 0.38560 0.48546 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs11132309
dbSNP Clinvar
186382206 2789.93 A G Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 1/1 22 SYNONYMOUS_CODING LOW None 0.38419 0.38420 0.48246 None None None None None None CCDC110|0.025241211|71.69%
View sample_cs2-enzar_recalibrated_variants_snps_only_hard_filtered_snps_only 4 rs28581909
dbSNP Clinvar
186391868 1149.34 T C Sample_CS2-EnzaR_recalibrated_variants_SNPS_only_Hard_Filtered_SNPS_only 0/1 24 None None None 0.38638 0.38640 0.04 0.00 None None None None None None CCDC110|0.025241211|71.69%
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