Name: mk266 final
Variants: 97048
Novel Variants: 1168 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 97048 55305 0/1 41583 1/1 160 1/2
Total Gene-associated SNVs 97048 55305 0/1 41583 1/1 160 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION139
CODON_CHANGE_PLUS_CODON_INSERTION97
CODON_DELETION50
CODON_INSERTION73
FRAME_SHIFT254
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED3
FRAME_SHIFT+STOP_LOST4
GENE_FUSION1
MOTIF_DELETED2
MOTIF[MA0003.1:Ap2alpha]16
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]7
MOTIF[MA0059.1:Cmyc]2
MOTIF[MA0062.1:Gabp]3
MOTIF[MA0062.2:Gabp]21
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]13
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]3
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]8
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]6
MOTIF[MA0138.2:Nrsf]6
MOTIF[MA0139.1:CTCF]71
MOTIF[MA0147.1:Cmyc]9
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]3
MOTIF[MA0162.1:Egr1]20
NON_SYNONYMOUS_CODING10860
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION232
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS254
SPLICE_SITE_REGION32
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING249
START_GAINED224
START_LOST17
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED109
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST23
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11477
SYNONYMOUS_STOP8
None0

Type Total Variants
1402
MISSENSE11135
NONSENSE111
SILENT11734
None0

Type Total Variants
HIGH722
LOW12086
MODERATE11455
MODIFIER119
None0

Type Total Variants
MG_INDEL_Filter78
MG_SNP_Filter3324
PASS93646

Quality Value
Min30.04
Average859.739884077669
Max47819.77

Read Depth Value
Min0
Average43.07450952106174
Max1586

Type Total Variants
None0

Chromossome Total Variants
19898
104379
116206
125243
131775
143493
153410
163947
175644
181628
196730
27008
202411
211438
222697
35039
43901
54260
64071
75306
83461
93911
X1113
Y79