Name: mk265 final
Variants: 93837
Novel Variants: 1077 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 93837 52761 0/1 40925 1/1 151 1/2
Total Gene-associated SNVs 93837 52761 0/1 40925 1/1 151 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION127
CODON_CHANGE_PLUS_CODON_INSERTION98
CODON_DELETION47
CODON_INSERTION71
FRAME_SHIFT234
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST4
GENE_FUSION_REVERESE1
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]15
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]10
MOTIF[MA0059.1:Cmyc]3
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]21
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]13
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]1
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]7
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]5
MOTIF[MA0138.2:Nrsf]3
MOTIF[MA0139.1:CTCF]66
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]11
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]18
NON_SYNONYMOUS_CODING10858
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION236
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS254
SPLICE_SITE_REGION30
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING240
START_GAINED216
START_LOST14
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED106
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST19
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING11302
SYNONYMOUS_STOP12
None0

Type Total Variants
1344
MISSENSE11131
NONSENSE110
SILENT11554
None0

Type Total Variants
HIGH696
LOW11894
MODERATE11439
MODIFIER110
None0

Type Total Variants
MG_INDEL_Filter80
MG_SNP_Filter3423
PASS90334

Quality Value
Min30.04
Average905.24073361223
Max43384.77

Read Depth Value
Min0
Average46.90334303100057
Max1514

Type Total Variants
None0

Chromossome Total Variants
18959
104262
115718
124503
131748
143517
153271
164452
175409
181695
196664
26714
202419
211461
222680
34933
43728
54015
63944
75114
83270
93899
X1462