Name: 20tes0779_fb
Variants: 222516
Novel Variants: 218777 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| 1109 | |
| CODON_CHANGE_PLUS_CODON_DELETION | 17 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 12 |
| CODON_DELETION | 22 |
| CODON_INSERTION | 19 |
| FRAME_SHIFT | 618 |
| FRAME_SHIFT+NON_SYNONYMOUS_CODING | 42 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 21 |
| FRAME_SHIFT+START_LOST | 2 |
| FRAME_SHIFT+STOP_GAINED | 21 |
| FRAME_SHIFT+STOP_GAINED+NON_SYNONYMOUS_CODING | 1 |
| FRAME_SHIFT+STOP_LOST | 2 |
| FRAME_SHIFT+SYNONYMOUS_CODING | 6 |
| MOTIF_DELETED | 1 |
| MOTIF[MA0003.1:Ap2alpha] | 13 |
| MOTIF[MA0014.1:Pax5] | 3 |
| MOTIF[MA0016.1:RXRA] | 6 |
| MOTIF[MA0024.1:E2F1] | 1 |
| MOTIF[MA0035.2:Gata1] | 4 |
| MOTIF[MA0036.1:Gata2] | 2 |
| MOTIF[MA0047.1:FOXA2] | 1 |
| MOTIF[MA0047.2:FOXA2] | 5 |
| MOTIF[MA0058.1:Max] | 17 |
| MOTIF[MA0059.1:Cmyc] | 5 |
| MOTIF[MA0062.1:Gabp] | 4 |
| MOTIF[MA0062.2:Gabp] | 24 |
| MOTIF[MA0065.1:PPARG] | 2 |
| MOTIF[MA0079.1:SP1] | 6 |
| MOTIF[MA0079.2:SP1] | 15 |
| MOTIF[MA0080.2:PU1] | 3 |
| MOTIF[MA0083.1:Srf] | 2 |
| MOTIF[MA0093.1:USF1] | 11 |
| MOTIF[MA0095.1:Yy1] | 5 |
| MOTIF[MA0099.1:Cfos] | 4 |
| MOTIF[MA0099.2:AP1] | 12 |
| MOTIF[MA0105.1:NFKB] | 1 |
| MOTIF[MA0114.1:HNF4A] | 10 |
| MOTIF[MA0138.2:Nrsf] | 11 |
| MOTIF[MA0139.1:CTCF] | 119 |
| MOTIF[MA0140.1:Tal1] | 3 |
| MOTIF[MA0147.1:Cmyc] | 13 |
| MOTIF[MA0148.1:FOXA1] | 6 |
| MOTIF[MA0154.1:EBF] | 13 |
| MOTIF[MA0159.1:RXR] | 3 |
| MOTIF[MA0162.1:Egr1] | 9 |
| MOTIF[MA0239.1:Pax5] | 1 |
| NON_SYNONYMOUS_CODING | 2424 |
| NON_SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_DELETION | 3 |
| NON_SYNONYMOUS_CODING+CODON_DELETION | 2 |
| NON_SYNONYMOUS_CODING+CODON_INSERTION | 2 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 79 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 75 |
| SPLICE_SITE_REGION | 16 |
| SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| SPLICE_SITE_REGION+CODON_DELETION | 2 |
| SPLICE_SITE_REGION+CODON_INSERTION | 1 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 52 |
| START_GAINED | 69 |
| START_LOST | 3 |
| START_LOST+SPLICE_SITE_REGION | 1 |
| STOP_GAINED | 124 |
| STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION | 2 |
| STOP_GAINED+CODON_INSERTION | 1 |
| STOP_GAINED+NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| STOP_GAINED+SPLICE_SITE_REGION | 8 |
| STOP_LOST | 9 |
| STOP_LOST+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| SYNONYMOUS_CODING | 1884 |
| SYNONYMOUS_START | 3 |
| SYNONYMOUS_STOP | 1 |
| TRANSCRIPT | 2 |
| None | 0 |
| Type | Total Variants |
|---|---|
| . | 222516 |
| Quality | Value |
|---|---|
| Min | 0.0 |
| Average | 627.058076077077 |
| Max | 199214.0 |
| Read Depth | Value |
|---|---|
| Min | 1 |
| Average | 43.64628610976289 |
| Max | 37105 |
| Type | Total Variants |
|---|---|
| None | 0 |