Name: galaxy43-snpeff_eff__on_data_37
Variants: 10539
Novel Variants: 4225 (Not in latest DbSNP Build)

Type Total Variants
CODON_DELETION1
FRAME_SHIFT+START_LOST1
MOTIF[MA0003.1:Ap2alpha]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]1
MOTIF[MA0062.2:Gabp]1
MOTIF[MA0079.1:SP1]4
MOTIF[MA0079.2:SP1]11
MOTIF[MA0083.1:Srf]1
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]5
MOTIF[MA0162.1:Egr1]2
NON_SYNONYMOUS_CODING29
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS2
SPLICE_SITE_REGION+SYNONYMOUS_CODING2
SYNONYMOUS_CODING75
None0

Type Total Variants
38
MISSENSE29
SILENT77
None0

Type Total Variants
HIGH4
LOW90
MODERATE30
MODIFIER20
None0

Type Total Variants
.10539

Quality Value
Min0.0
Average974.171857200689
Max4499.66

Read Depth Value
Min2
Average68.41910997248316
Max252

Type Total Variants
None0

Chromossome Total Variants
12746
10690
111056
12310
13357
1491
15802
16415
17151
18267
19605
2411
2061
2131
22190
3537
475
5323
6192
7852
858
9121
X175
Y23