Name: mm210206egs
Variants: 166814
Novel Variants: 3367 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 166814 12813 0|1 96070 0/1 5610 1|1 50771 1/1 1550 1/2
Total Gene-associated SNVs 166814 12813 0|1 96070 0/1 5610 1|1 50771 1/1 1550 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION132
CODON_CHANGE_PLUS_CODON_INSERTION89
CODON_DELETION58
CODON_INSERTION77
FRAME_SHIFT246
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST3
GENE_FUSION1
GENE_FUSION_REVERESE1
MOTIF_DELETED6
MOTIF[MA0003.1:Ap2alpha]31
MOTIF[MA0014.1:Pax5]5
MOTIF[MA0016.1:RXRA]5
MOTIF[MA0024.1:E2F1]7
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]15
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]13
MOTIF[MA0062.2:Gabp]28
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]5
MOTIF[MA0079.2:SP1]21
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]6
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]7
MOTIF[MA0095.1:Yy1]11
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]1
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]7
MOTIF[MA0138.2:Nrsf]7
MOTIF[MA0139.1:CTCF]120
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]12
MOTIF[MA0154.1:EBF]5
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]46
NON_SYNONYMOUS_CODING12244
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION264
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS7
PROTEIN_STRUCTURAL_INTERACTION_LOCUS285
SPLICE_SITE_REGION49
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING299
START_GAINED366
START_LOST13
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED121
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST31
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING12959
SYNONYMOUS_STOP14
TRANSCRIPT4
None0

Type Total Variants
1750
MISSENSE12556
NONSENSE124
SILENT13272
None0

Type Total Variants
HIGH766
LOW13857
MODERATE12868
MODIFIER211
None0

Type Total Variants
PASS166814

Quality Value
Min30.0
Average2081.92464001842
Max386341.09

Read Depth Value
Min0
Average66.9873931444603
Max10831

Type Total Variants
None0

Chromossome Total Variants
116514
107280
119780
128603
133124
145611
156007
167505
179374
182683
1910967
211659
204163
212578
223948
38840
46638
57046
610439
78789
85821
97134
X2174
Y137