Name: mm210202rsv
Variants: 150414
Novel Variants: 3012 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 150414 11478 0|1 80118 0/1 5367 1|1 52025 1/1 1426 1/2
Total Gene-associated SNVs 150414 11478 0|1 80118 0/1 5367 1|1 52025 1/1 1426 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION142
CODON_CHANGE_PLUS_CODON_INSERTION96
CODON_DELETION55
CODON_INSERTION74
FRAME_SHIFT208
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST4
GENE_FUSION1
GENE_FUSION_REVERESE1
MOTIF_DELETED3
MOTIF[MA0003.1:Ap2alpha]31
MOTIF[MA0014.1:Pax5]6
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]6
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0058.1:Max]20
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]8
MOTIF[MA0062.2:Gabp]35
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]6
MOTIF[MA0079.2:SP1]19
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]5
MOTIF[MA0095.1:Yy1]9
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]13
MOTIF[MA0138.2:Nrsf]6
MOTIF[MA0139.1:CTCF]108
MOTIF[MA0140.1:Tal1]3
MOTIF[MA0147.1:Cmyc]13
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]39
NON_SYNONYMOUS_CODING11212
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION250
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS244
SPLICE_SITE_REGION41
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING241
START_GAINED331
START_LOST15
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION1
STOP_GAINED115
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST29
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11611
SYNONYMOUS_STOP11
TRANSCRIPT2
None0

Type Total Variants
1617
MISSENSE11510
NONSENSE119
SILENT11863
None0

Type Total Variants
HIGH679
LOW12403
MODERATE11832
MODIFIER195
None0

Type Total Variants
PASS150414

Quality Value
Min30.05
Average2173.51074374767
Max386341.09

Read Depth Value
Min0
Average60.58795723802306
Max7708

Type Total Variants
None0

Chromossome Total Variants
114709
106458
118698
128002
132974
145380
154979
166298
178259
182533
199617
211532
203713
212287
223602
38158
46138
56554
69204
77794
85426
96191
X1751
Y157