Name: s2421nr2_snvs
Variants: 38780
Novel Variants: 249 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| 40 | |
| MOTIF[MA0003.1:Ap2alpha] | 4 |
| MOTIF[MA0014.1:Pax5] | 2 |
| MOTIF[MA0024.1:E2F1] | 3 |
| MOTIF[MA0035.2:Gata1] | 1 |
| MOTIF[MA0058.1:Max] | 1 |
| MOTIF[MA0059.1:Cmyc] | 1 |
| MOTIF[MA0062.2:Gabp] | 3 |
| MOTIF[MA0065.1:PPARG] | 1 |
| MOTIF[MA0065.2:PPARG] | 1 |
| MOTIF[MA0079.2:SP1] | 2 |
| MOTIF[MA0080.1:PU1] | 1 |
| MOTIF[MA0093.1:USF1] | 1 |
| MOTIF[MA0095.1:Yy1] | 1 |
| MOTIF[MA0114.1:HNF4A] | 3 |
| MOTIF[MA0139.1:CTCF] | 15 |
| MOTIF[MA0147.1:Cmyc] | 2 |
| MOTIF[MA0154.1:EBF] | 3 |
| MOTIF[MA0162.1:Egr1] | 9 |
| NON_SYNONYMOUS_CODING | 10717 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 219 |
| NON_SYNONYMOUS_START | 2 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 6 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 260 |
| SPLICE_SITE_REGION | 21 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 232 |
| START_GAINED | 90 |
| START_LOST | 12 |
| STOP_GAINED | 88 |
| STOP_GAINED+SPLICE_SITE_REGION | 2 |
| STOP_LOST | 25 |
| STOP_LOST+SPLICE_SITE_REGION | 4 |
| SYNONYMOUS_CODING | 11165 |
| SYNONYMOUS_STOP | 9 |
| None | 0 |
| Type | Total Variants |
|---|---|
| . | 38780 |
| Quality | Value |
|---|---|
| Min | 0.0 |
| Average | 0.0 |
| Max | 0.0 |
| Read Depth | Value |
|---|---|
| Min | 0 |
| Average | 0.0 |
| Max | 0 |
| Type | Total Variants |
|---|---|
| None | 0 |