Name: s2421nr2_snvs
Variants: 38780
Novel Variants: 249 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 38780 22281 0/1 16499 1/1
Total Gene-associated SNVs 38780 22281 0/1 16499 1/1

Type Total Variants
40
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0014.1:Pax5]2
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]1
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]3
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.2:SP1]2
MOTIF[MA0080.1:PU1]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0114.1:HNF4A]3
MOTIF[MA0139.1:CTCF]15
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0154.1:EBF]3
MOTIF[MA0162.1:Egr1]9
NON_SYNONYMOUS_CODING10717
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION219
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS6
PROTEIN_STRUCTURAL_INTERACTION_LOCUS260
SPLICE_SITE_REGION21
SPLICE_SITE_REGION+SYNONYMOUS_CODING232
START_GAINED90
START_LOST12
STOP_GAINED88
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST25
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING11165
SYNONYMOUS_STOP9
None0

Type Total Variants
471
MISSENSE10979
NONSENSE90
SILENT11406
None0

Type Total Variants
HIGH397
LOW11540
MODERATE10936
MODIFIER73
None0

Type Total Variants
.38780

Quality Value
Min0.0
Average0.0
Max0.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
13879
101247
112718
122167
13879
141278
151223
161682
172313
18549
192811
22786
20937
21564
22579
32169
41576
51446
62444
71962
81349
91610
M40
X563
Y9