Name: dnl435773_hfn
Variants: 165534
Novel Variants: 1113 (Not in latest DbSNP Build)
| Type | Total Variants | ||||
|---|---|---|---|---|---|
| Total SNVs | 165534 | 211 0 | 106789 0/1 | 558 1 | 57976 1/1 |
| Total Gene-associated SNVs | 165534 | 211 0 | 106789 0/1 | 558 1 | 57976 1/1 |
| Type | Total Variants |
|---|---|
| MOTIF[MA0003.1:Ap2alpha] | 1 |
| MOTIF[MA0005.1:MEF2C] | 1 |
| MOTIF[MA0024.1:E2F1] | 2 |
| MOTIF[MA0036.1:Gata2] | 4 |
| MOTIF[MA0047.1:FOXA2] | 2 |
| MOTIF[MA0047.2:FOXA2] | 5 |
| MOTIF[MA0058.1:Max] | 10 |
| MOTIF[MA0059.1:Cmyc] | 1 |
| MOTIF[MA0062.1:Gabp] | 1 |
| MOTIF[MA0062.2:Gabp] | 1 |
| MOTIF[MA0065.1:PPARG] | 4 |
| MOTIF[MA0074.1:RXRA] | 1 |
| MOTIF[MA0079.1:SP1] | 2 |
| MOTIF[MA0079.2:SP1] | 4 |
| MOTIF[MA0080.1:PU1] | 1 |
| MOTIF[MA0080.2:PU1] | 2 |
| MOTIF[MA0083.1:Srf] | 2 |
| MOTIF[MA0093.1:USF1] | 13 |
| MOTIF[MA0095.1:Yy1] | 3 |
| MOTIF[MA0099.1:Cfos] | 10 |
| MOTIF[MA0099.2:AP1] | 9 |
| MOTIF[MA0105.1:NFKB] | 1 |
| MOTIF[MA0114.1:HNF4A] | 6 |
| MOTIF[MA0138.2:Nrsf] | 9 |
| MOTIF[MA0139.1:CTCF] | 53 |
| MOTIF[MA0140.1:Tal1] | 5 |
| MOTIF[MA0147.1:Cmyc] | 1 |
| MOTIF[MA0148.1:FOXA1] | 4 |
| MOTIF[MA0154.1:EBF] | 4 |
| MOTIF[MA0162.1:Egr1] | 5 |
| NON_SYNONYMOUS_CODING | 2562 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 59 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 55 |
| SPLICE_SITE_REGION | 16 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 54 |
| START_GAINED | 52 |
| START_LOST | 2 |
| STOP_GAINED | 20 |
| STOP_GAINED+SPLICE_SITE_REGION | 2 |
| STOP_LOST | 5 |
| STOP_LOST+SPLICE_SITE_REGION | 1 |
| SYNONYMOUS_CODING | 1623 |
| SYNONYMOUS_START | 2 |
| SYNONYMOUS_STOP | 10 |
| None | 0 |
| Type | Total Variants |
|---|---|
| . | 165534 |
| Quality | Value |
|---|---|
| Min | 0.0 |
| Average | 0.0 |
| Max | 0.0 |
| Read Depth | Value |
|---|---|
| Min | 0 |
| Average | 0.0 |
| Max | 0 |
| Type | Total Variants |
|---|---|
| None | 0 |