Name: 94231510241520_annotated
Variants: 45099
Novel Variants: 358 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 45099 28252 0/1 16796 1/1 51 1/2
Total Gene-associated SNVs 45099 28252 0/1 16796 1/1 51 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION76
CODON_CHANGE_PLUS_CODON_INSERTION56
CODON_DELETION35
CODON_INSERTION64
FRAME_SHIFT207
FRAME_SHIFT+SPLICE_SITE_REGION38
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST3
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]4
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]8
MOTIF[MA0079.2:SP1]5
MOTIF[MA0080.1:PU1]1
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]3
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]21
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0162.1:Egr1]4
NON_SYNONYMOUS_CODING9269
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION181
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS218
SPLICE_SITE_REGION12
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING200
START_GAINED91
START_LOST6
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED83
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST22
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING10127
SYNONYMOUS_STOP7
None0

Type Total Variants
882
MISSENSE9480
NONSENSE86
SILENT10334
None0

Type Total Variants
HIGH597
LOW10469
MODERATE9684
MODIFIER32
None0

Type Total Variants
Indel_QC77
PASS43642
SNP_QC1380

Quality Value
Min30.73
Average2314.79081287817
Max38408.77

Read Depth Value
Min1
Average122.48205059979156
Max1294

Type Total Variants
None0

Chromossome Total Variants
14426
101936
113269
122471
13888
141756
151547
161945
172588
18694
193209
23025
201115
21652
221101
32271
41765
51942
61906
72622
81557
91886
X512
Y16