Name: 94231510241520_annotated
Variants: 45099
Novel Variants: 358 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 76 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 56 |
| CODON_DELETION | 35 |
| CODON_INSERTION | 64 |
| FRAME_SHIFT | 207 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 38 |
| FRAME_SHIFT+START_LOST | 4 |
| FRAME_SHIFT+STOP_GAINED | 6 |
| FRAME_SHIFT+STOP_LOST | 3 |
| MOTIF[MA0003.1:Ap2alpha] | 4 |
| MOTIF[MA0014.1:Pax5] | 3 |
| MOTIF[MA0016.1:RXRA] | 1 |
| MOTIF[MA0024.1:E2F1] | 2 |
| MOTIF[MA0035.2:Gata1] | 1 |
| MOTIF[MA0058.1:Max] | 4 |
| MOTIF[MA0059.1:Cmyc] | 1 |
| MOTIF[MA0062.2:Gabp] | 8 |
| MOTIF[MA0079.2:SP1] | 5 |
| MOTIF[MA0080.1:PU1] | 1 |
| MOTIF[MA0083.1:Srf] | 1 |
| MOTIF[MA0093.1:USF1] | 1 |
| MOTIF[MA0095.1:Yy1] | 3 |
| MOTIF[MA0138.2:Nrsf] | 1 |
| MOTIF[MA0139.1:CTCF] | 21 |
| MOTIF[MA0147.1:Cmyc] | 3 |
| MOTIF[MA0162.1:Egr1] | 4 |
| NON_SYNONYMOUS_CODING | 9269 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 181 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 3 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 218 |
| SPLICE_SITE_REGION | 12 |
| SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| SPLICE_SITE_REGION+CODON_DELETION | 1 |
| SPLICE_SITE_REGION+CODON_INSERTION | 1 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 200 |
| START_GAINED | 91 |
| START_LOST | 6 |
| START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| STOP_GAINED | 83 |
| STOP_GAINED+CODON_INSERTION | 1 |
| STOP_GAINED+SPLICE_SITE_REGION | 3 |
| STOP_LOST | 22 |
| STOP_LOST+SPLICE_SITE_REGION | 2 |
| SYNONYMOUS_CODING | 10127 |
| SYNONYMOUS_STOP | 7 |
| None | 0 |
| Quality | Value |
|---|---|
| Min | 30.73 |
| Average | 2314.79081287803 |
| Max | 38408.77 |
| Read Depth | Value |
|---|---|
| Min | 1 |
| Average | 122.48205059979156 |
| Max | 1294 |
| Type | Total Variants |
|---|---|
| None | 0 |