Name: child filtered_variants
Variants: 135214
Novel Variants: 2734 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION155
CODON_CHANGE_PLUS_CODON_INSERTION109
CODON_DELETION58
CODON_INSERTION85
FRAME_SHIFT363
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST4
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED7
MOTIF[MA0003.1:Ap2alpha]23
MOTIF[MA0014.1:Pax5]8
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]6
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]18
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]6
MOTIF[MA0062.2:Gabp]26
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]8
MOTIF[MA0079.2:SP1]29
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]5
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]11
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]11
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.1:Nrsf]2
MOTIF[MA0138.2:Nrsf]6
MOTIF[MA0139.1:CTCF]93
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]7
MOTIF[MA0154.1:EBF]4
MOTIF[MA0162.1:Egr1]41
NON_SYNONYMOUS_CODING12679
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION260
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS301
SPLICE_SITE_REGION70
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING263
SPLICE_SITE_REGION+SYNONYMOUS_STOP1
START_GAINED350
START_LOST9
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED133
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST27
STOP_LOST+SPLICE_SITE_REGION5
SYNONYMOUS_CODING12282
SYNONYMOUS_STOP13
TRANSCRIPT5
None0

Type Total Variants
1895
MISSENSE12980
NONSENSE136
SILENT12559
None0

Type Total Variants
HIGH904
LOW13134
MODERATE13349
MODIFIER183
None0

Type Total Variants
INDEL_LowQualityDepth1537
INDEL_LowQualityDepth;LowQual274
INDEL_ReadPosRankSumLow1
INDEL_StrandBias1
LowQual108
LowQual;SnpCluster20
LowQual;SNP_LowQualityDepth120
LowQual;SNP_LowQualityDepth;SnpCluster72
LowQual;SNP_LowQualityDepth;SNP_MappingQuality83
LowQual;SNP_LowQualityDepth;SNP_MappingQuality;SnpCluster15
LowQual;SNP_LowQualityDepth;SNP_MappingQuality;SNP_StrandBias3
LowQual;SNP_LowQualityDepth;SNP_StrandBias6
LowQual;SNP_LowQualityDepth;SNP_StrandBias;SnpCluster1
LowQual;SNP_MappingQuality41
LowQual;SNP_MappingQuality;SnpCluster10
PASS115806
SnpCluster7782
SNP_LowQualityDepth472
SNP_LowQualityDepth;SnpCluster799
SNP_LowQualityDepth;SNP_MappingQuality333
SNP_LowQualityDepth;SNP_MappingQuality;SnpCluster178
SNP_LowQualityDepth;SNP_MappingQuality;SNP_ReadPosRankSumLow2
SNP_LowQualityDepth;SNP_MappingQuality;SNP_StrandBias28
SNP_LowQualityDepth;SNP_MappingQuality;SNP_StrandBias;SnpCluster9
SNP_LowQualityDepth;SNP_MQRankSumLow22
SNP_LowQualityDepth;SNP_MQRankSumLow;SnpCluster51
SNP_LowQualityDepth;SNP_MQRankSumLow;SNP_MappingQuality4
SNP_LowQualityDepth;SNP_MQRankSumLow;SNP_ReadPosRankSumLow2
SNP_LowQualityDepth;SNP_MQRankSumLow;SNP_ReadPosRankSumLow;SnpCluster4
SNP_LowQualityDepth;SNP_ReadPosRankSumLow5
SNP_LowQualityDepth;SNP_ReadPosRankSumLow;SnpCluster6
SNP_LowQualityDepth;SNP_StrandBias43
SNP_LowQualityDepth;SNP_StrandBias;SnpCluster49
SNP_MappingQuality4050
SNP_MappingQuality;SnpCluster1334
SNP_MappingQuality;SNP_ReadPosRankSumLow2
SNP_MappingQuality;SNP_ReadPosRankSumLow;SnpCluster8
SNP_MappingQuality;SNP_ReadPosRankSumLow;SNP_StrandBias;SnpCluster2
SNP_MappingQuality;SNP_StrandBias203
SNP_MappingQuality;SNP_StrandBias;SnpCluster69
SNP_MQRankSumLow572
SNP_MQRankSumLow;SnpCluster640
SNP_MQRankSumLow;SNP_MappingQuality32
SNP_MQRankSumLow;SNP_MappingQuality;SnpCluster3
SNP_MQRankSumLow;SNP_MappingQuality;SNP_ReadPosRankSumLow;SNP_StrandBias1
SNP_MQRankSumLow;SNP_MappingQuality;SNP_StrandBias6
SNP_MQRankSumLow;SNP_ReadPosRankSumLow3
SNP_MQRankSumLow;SNP_ReadPosRankSumLow;SnpCluster5
SNP_MQRankSumLow;SNP_ReadPosRankSumLow;SNP_StrandBias;SnpCluster1
SNP_MQRankSumLow;SNP_StrandBias45
SNP_MQRankSumLow;SNP_StrandBias;SnpCluster55
SNP_ReadPosRankSumLow9
SNP_ReadPosRankSumLow;SnpCluster17
SNP_ReadPosRankSumLow;SNP_StrandBias1
SNP_StrandBias112
SNP_StrandBias;SnpCluster157

Quality Value
Min10.08
Average4371.74996612742
Max180835.9

Read Depth Value
Min0
Average81.9235286286923
Max2747

Type Total Variants
None0

Chromossome Total Variants
113248
105644
117780
127108
132435
144405
154625
166181
177233
182405
199340
29601
203297
212107
223717
37058
45274
55476
68110
77028
84549
95838
MT9
X2432
Y314