Name: 56001801068832b_wgz indel
Variants: 825517
Novel Variants: 85966 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 825517 496972 0/1 291604 1/1 36941 1/2
Total Gene-associated SNVs 825517 496972 0/1 291604 1/1 36941 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION130
CODON_CHANGE_PLUS_CODON_INSERTION86
CODON_DELETION56
CODON_INSERTION58
FRAME_SHIFT245
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED3
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
GENE_FUSION_REVERESE1
MOTIF_DELETED36
MOTIF[MA0003.1:Ap2alpha]28
MOTIF[MA0014.1:Pax5]2
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]6
MOTIF[MA0035.2:Gata1]3
MOTIF[MA0047.1:FOXA2]3
MOTIF[MA0047.2:FOXA2]2
MOTIF[MA0058.1:Max]25
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]24
MOTIF[MA0065.1:PPARG]3
MOTIF[MA0074.1:RXRA]1
MOTIF[MA0079.1:SP1]25
MOTIF[MA0079.2:SP1]79
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]14
MOTIF[MA0093.1:USF1]9
MOTIF[MA0095.1:Yy1]5
MOTIF[MA0099.1:Cfos]5
MOTIF[MA0099.2:AP1]5
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]14
MOTIF[MA0138.2:Nrsf]9
MOTIF[MA0139.1:CTCF]78
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]11
MOTIF[MA0148.1:FOXA1]7
MOTIF[MA0154.1:EBF]10
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]75
PROTEIN_STRUCTURAL_INTERACTION_LOCUS1
SPLICE_SITE_REGION46
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION1
SPLICE_SITE_REGION+CODON_INSERTION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
TRANSCRIPT8
None0

Type Total Variants
1180
None0

Type Total Variants
HIGH299
LOW540
MODERATE333
MODIFIER8
None0

Type Total Variants
PASS825517

Quality Value
Min10.15
Average416.237617177863
Max3522.73

Read Depth Value
Min0
Average20.590513581186094
Max79

Type Total Variants
None0

Chromossome Total Variants
165309
1040439
1139094
1240018
1330821
1426641
1525096
1624313
1725665
1822594
1922265
266618
2017430
2112621
2211766
354989
455588
549062
647602
747146
839085
932774
X28580
Y1