Name: chr1_tb
Variants: 5198
Novel Variants: 5125 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 5198 3 0|0 188 0|1 2916 0/1 116 1|1 1975 1/1
Total Gene-associated SNVs 5198 3 0|0 188 0|1 2916 0/1 116 1|1 1975 1/1

Type Total Variants
FRAME_SHIFT13
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]2
MOTIF[MA0162.1:Egr1]1
NON_SYNONYMOUS_CODING71
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS1
SPLICE_SITE_REGION+SYNONYMOUS_CODING2
START_GAINED1
STOP_GAINED5
STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION1
SYNONYMOUS_CODING58
None0

Type Total Variants
63
MISSENSE72
NONSENSE5
SILENT19
None0

Type Total Variants
HIGH20
LOW62
MODERATE72
MODIFIER5
None0

Type Total Variants
ExcessHet2
PASS5196

Quality Value
Min31.43
Average126428.513953444
Max1262170.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
15198