Name: tsvc_variants_ionxpress_028
Variants: 30592
Novel Variants: 668 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 30592 20138 0/1 2 0/2 10373 1/1 67 1/2 12 2/2
Total Gene-associated SNVs 30592 20138 0/1 2 0/2 10373 1/1 67 1/2 12 2/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION39
CODON_CHANGE_PLUS_CODON_INSERTION29
CODON_DELETION27
CODON_INSERTION21
FRAME_SHIFT83
FRAME_SHIFT+SPLICE_SITE_REGION22
FRAME_SHIFT+START_LOST2
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
MOTIF[MA0003.1:Ap2alpha]5
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0058.1:Max]5
MOTIF[MA0062.1:Gabp]1
MOTIF[MA0062.2:Gabp]9
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]2
MOTIF[MA0080.1:PU1]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]3
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]19
MOTIF[MA0147.1:Cmyc]1
MOTIF[MA0162.1:Egr1]4
NON_SYNONYMOUS_CODING6012
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION107
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS164
SPLICE_SITE_REGION9
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING129
START_GAINED75
START_LOST5
STOP_GAINED45
STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST15
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING6854
SYNONYMOUS_STOP4
TRANSCRIPT1
None0

Type Total Variants
638
MISSENSE6038
NONSENSE46
SILENT6987
None0

Type Total Variants
HIGH345
LOW7097
MODERATE6236
MODIFIER31
None0

Type Total Variants
PASS30592

Quality Value
Min10.0
Average327.629343756538
Max2979.09

Read Depth Value
Min29
Average101.6798836297071
Max746

Type Total Variants
None0

Chromossome Total Variants
13240
101276
112148
121528
13418
14878
15977
161412
172224
18427
192710
21802
20906
21415
22781
31566
4982
51263
61774
71346
81026
91295
X198