Name: tsvc_variants_ionxpress_029
Variants: 32973
Novel Variants: 768 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 32973 21441 0/1 6 0/2 11428 1/1 81 1/2 1 1/3 15 2/2 1 2/3
Total Gene-associated SNVs 32973 21441 0/1 6 0/2 11428 1/1 81 1/2 1 1/3 15 2/2 1 2/3

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION58
CODON_CHANGE_PLUS_CODON_INSERTION27
CODON_DELETION25
CODON_INSERTION27
FRAME_SHIFT93
FRAME_SHIFT+SPLICE_SITE_REGION25
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED1
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION1
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
MOTIF[MA0003.1:Ap2alpha]8
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0058.1:Max]5
MOTIF[MA0062.1:Gabp]3
MOTIF[MA0062.2:Gabp]7
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]1
MOTIF[MA0080.2:PU1]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]20
MOTIF[MA0147.1:Cmyc]1
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]4
NON_SYNONYMOUS_CODING6293
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION136
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS172
SPLICE_SITE_REGION11
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING147
START_GAINED78
START_LOST6
STOP_GAINED41
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST17
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING7336
SYNONYMOUS_STOP7
TRANSCRIPT1
None0

Type Total Variants
704
MISSENSE6342
NONSENSE41
SILENT7489
None0

Type Total Variants
HIGH366
LOW7610
MODERATE6567
MODIFIER33
None0

Type Total Variants
PASS32973

Quality Value
Min10.0
Average358.349795863281
Max2978.32

Read Depth Value
Min28
Average109.85121159736754
Max761

Type Total Variants
None0

Chromossome Total Variants
13446
101313
112223
121620
13450
14974
151087
161605
172195
18476
192759
21981
20819
21484
22906
31684
41074
51369
61862
71530
81097
91401
X618