Name: tsvc_variants_ionxpress_032
Variants: 29675
Novel Variants: 706 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 29675 18676 0/1 3 0/2 10917 1/1 66 1/2 13 2/2
Total Gene-associated SNVs 29675 18676 0/1 3 0/2 10917 1/1 66 1/2 13 2/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION48
CODON_CHANGE_PLUS_CODON_INSERTION31
CODON_DELETION23
CODON_INSERTION22
FRAME_SHIFT92
FRAME_SHIFT+SPLICE_SITE_REGION22
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_LOST2
MOTIF[MA0003.1:Ap2alpha]9
MOTIF[MA0058.1:Max]5
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]3
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]1
MOTIF[MA0080.1:PU1]1
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]3
MOTIF[MA0114.1:HNF4A]2
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]20
MOTIF[MA0147.1:Cmyc]1
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]6
NON_SYNONYMOUS_CODING5689
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION119
PROTEIN_STRUCTURAL_INTERACTION_LOCUS165
SPLICE_SITE_REGION9
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING133
START_GAINED84
START_LOST4
STOP_GAINED35
STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED+CODON_INSERTION2
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST14
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING6577
SYNONYMOUS_STOP3
TRANSCRIPT1
None0

Type Total Variants
670
MISSENSE5722
NONSENSE36
SILENT6712
None0

Type Total Variants
HIGH342
LOW6835
MODERATE5933
MODIFIER30
None0

Type Total Variants
PASS29675

Quality Value
Min10.0
Average370.717219518112
Max2982.14

Read Depth Value
Min22
Average109.7013647851727
Max1460

Type Total Variants
None0

Chromossome Total Variants
13126
101217
112075
121391
13391
14887
151049
161453
172198
18394
192716
21453
20897
21455
22794
31497
4892
51153
61713
71261
8956
91196
X511