Name: p767-full_variant_table
Variants: 24419
Novel Variants: 974 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 24419 14910 0/1 9509 1/1
Total Gene-associated SNVs 24419 14910 0/1 9509 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION83
CODON_CHANGE_PLUS_CODON_INSERTION32
CODON_DELETION30
CODON_INSERTION24
FRAME_SHIFT24
FRAME_SHIFT+SPLICE_SITE_REGION8
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED1
FRAME_SHIFT+STOP_LOST1
GENE_FUSION2
MOTIF_DELETED2
MOTIF[MA0003.1:Ap2alpha]8
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]6
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]5
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]7
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]3
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]16
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]5
NON_SYNONYMOUS_CODING2444
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION53
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS109
SPLICE_SITE_REGION7
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING66
START_GAINED64
START_LOST2
STOP_GAINED20
STOP_LOST6
SYNONYMOUS_CODING3278
SYNONYMOUS_STOP3
None0

Type Total Variants
454
MISSENSE2505
NONSENSE20
SILENT3347
None0

Type Total Variants
HIGH176
LOW3453
MODERATE2667
MODIFIER30
None0

Type Total Variants
homopolymer_region9
homopolymer_region;off_target49
low_coverage151
low_coverage;low_variant_fraction;off_target3
low_coverage;off_target4533
low_variant_fraction281
low_variant_fraction;off_target158
off_target12846
PASS6389

Quality Value
Min101.0
Average869.423031246161
Max10000.0

Read Depth Value
Min6
Average55.17867234530488
Max852

Type Total Variants
None0

Chromossome Total Variants
12281
101114
111533
121416
13584
14685
15769
161078
171414
18444
191289
22034
20435
21378
22512
31320
41103
51183
61063
71131
8932
91160
X561