Name: df-full_variant_table
Variants: 20017
Novel Variants: 763 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 20017 11597 0/1 8420 1/1
Total Gene-associated SNVs 20017 11597 0/1 8420 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION75
CODON_CHANGE_PLUS_CODON_INSERTION22
CODON_DELETION27
CODON_INSERTION15
FRAME_SHIFT23
FRAME_SHIFT+SPLICE_SITE_REGION8
FRAME_SHIFT+STOP_GAINED2
FRAME_SHIFT+STOP_LOST1
GENE_FUSION1
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0058.1:Max]3
MOTIF[MA0062.2:Gabp]3
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]1
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]11
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0162.1:Egr1]8
NON_SYNONYMOUS_CODING2442
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION54
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS118
SPLICE_SITE_REGION7
SPLICE_SITE_REGION+SYNONYMOUS_CODING51
START_GAINED53
START_LOST3
STOP_GAINED19
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST8
SYNONYMOUS_CODING3271
SYNONYMOUS_STOP1
None0

Type Total Variants
391
MISSENSE2507
NONSENSE20
SILENT3323
None0

Type Total Variants
HIGH187
LOW3403
MODERATE2635
MODIFIER16
None0

Type Total Variants
homopolymer_region4
homopolymer_region;off_target26
low_coverage141
low_coverage;homopolymer_region;off_target1
low_coverage;low_variant_fraction;off_target2
low_coverage;off_target3617
low_variant_fraction367
low_variant_fraction;off_target135
off_target9488
PASS6236

Quality Value
Min101.0
Average1139.76709796673
Max10000.0

Read Depth Value
Min7
Average62.076235200079935
Max2172

Type Total Variants
None0

Chromossome Total Variants
11876
10916
111275
121146
13477
14595
15686
16890
171254
18398
191028
21693
20400
21305
22427
31061
4844
5948
6904
7950
8734
9934
X273
Y3