Name: alves-daniel
Variants: 103647
Novel Variants: 4124 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 103647 71123 0/1 32524 1/1
Total Gene-associated SNVs 103647 71123 0/1 32524 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION100
CODON_CHANGE_PLUS_CODON_INSERTION59
CODON_DELETION35
CODON_INSERTION43
FRAME_SHIFT155
FRAME_SHIFT+SPLICE_SITE_REGION29
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST3
MOTIF[MA0003.1:Ap2alpha]2
MOTIF[MA0014.1:Pax5]2
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]6
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]12
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]10
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]1
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]3
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]54
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0154.1:EBF]2
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]17
NON_SYNONYMOUS_CODING11907
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION251
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS7
PROTEIN_STRUCTURAL_INTERACTION_LOCUS255
SPLICE_SITE_REGION24
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING273
SPLICE_SITE_REGION+SYNONYMOUS_STOP1
START_GAINED168
START_LOST12
STOP_GAINED121
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST27
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING11789
SYNONYMOUS_STOP14
None0

Type Total Variants
1023
MISSENSE12200
NONSENSE123
SILENT12077
None0

Type Total Variants
HIGH622
LOW12320
MODERATE12399
MODIFIER82
None0

Type Total Variants
PASS103647

Quality Value
Min0.0
Average0.0
Max0.0

Read Depth Value
Min20
Average117.87258676083245
Max7928

Type Total Variants
None0

Chromossome Total Variants
18912
105719
115540
124749
131513
142893
153182
165402
175846
182226
195715
28719
202592
212153
222672
34570
45016
53626
65038
74814
83575
95130
MT33
X1693
Y2319