Name: alves-daniel
Variants: 103647
Novel Variants: 4124 (Not in latest DbSNP Build)
Type | Total Variants |
---|---|
CODON_CHANGE_PLUS_CODON_DELETION | 100 |
CODON_CHANGE_PLUS_CODON_INSERTION | 59 |
CODON_DELETION | 35 |
CODON_INSERTION | 43 |
FRAME_SHIFT | 155 |
FRAME_SHIFT+SPLICE_SITE_REGION | 29 |
FRAME_SHIFT+START_LOST | 4 |
FRAME_SHIFT+STOP_GAINED | 4 |
FRAME_SHIFT+STOP_LOST | 3 |
MOTIF[MA0003.1:Ap2alpha] | 2 |
MOTIF[MA0014.1:Pax5] | 2 |
MOTIF[MA0016.1:RXRA] | 1 |
MOTIF[MA0024.1:E2F1] | 1 |
MOTIF[MA0035.2:Gata1] | 1 |
MOTIF[MA0058.1:Max] | 6 |
MOTIF[MA0059.1:Cmyc] | 1 |
MOTIF[MA0062.1:Gabp] | 5 |
MOTIF[MA0062.2:Gabp] | 12 |
MOTIF[MA0079.1:SP1] | 2 |
MOTIF[MA0079.2:SP1] | 10 |
MOTIF[MA0080.1:PU1] | 1 |
MOTIF[MA0080.2:PU1] | 1 |
MOTIF[MA0093.1:USF1] | 2 |
MOTIF[MA0095.1:Yy1] | 4 |
MOTIF[MA0099.1:Cfos] | 1 |
MOTIF[MA0099.2:AP1] | 3 |
MOTIF[MA0114.1:HNF4A] | 1 |
MOTIF[MA0139.1:CTCF] | 54 |
MOTIF[MA0147.1:Cmyc] | 2 |
MOTIF[MA0154.1:EBF] | 2 |
MOTIF[MA0159.1:RXR] | 1 |
MOTIF[MA0162.1:Egr1] | 17 |
NON_SYNONYMOUS_CODING | 11907 |
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 251 |
NON_SYNONYMOUS_START | 1 |
PROTEIN_PROTEIN_INTERACTION_LOCUS | 7 |
PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 255 |
SPLICE_SITE_REGION | 24 |
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
SPLICE_SITE_REGION+CODON_DELETION | 2 |
SPLICE_SITE_REGION+CODON_INSERTION | 1 |
SPLICE_SITE_REGION+SYNONYMOUS_CODING | 273 |
SPLICE_SITE_REGION+SYNONYMOUS_STOP | 1 |
START_GAINED | 168 |
START_LOST | 12 |
STOP_GAINED | 121 |
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
STOP_GAINED+SPLICE_SITE_REGION | 2 |
STOP_LOST | 27 |
STOP_LOST+SPLICE_SITE_REGION | 2 |
SYNONYMOUS_CODING | 11789 |
SYNONYMOUS_STOP | 14 |
None | 0 |
Type | Total Variants |
---|---|
PASS | 103647 |
Quality | Value |
---|---|
Min | 0.0 |
Average | 0.0 |
Max | 0.0 |
Read Depth | Value |
---|---|
Min | 20 |
Average | 117.87258676083245 |
Max | 7928 |
Type | Total Variants |
---|---|
None | 0 |