Name: udp5435_axeq_1_hs37d5_remdup-uniqmap
Variants: 70785
Novel Variants: 4857 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 70785 39979 0/1 30806 1/1
Total Gene-associated SNVs 70785 39979 0/1 30806 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION55
CODON_CHANGE_PLUS_CODON_INSERTION35
CODON_DELETION74
CODON_INSERTION69
FRAME_SHIFT127
FRAME_SHIFT+SPLICE_SITE_REGION36
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED1
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
MOTIF[MA0003.1:Ap2alpha]7
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0058.1:Max]9
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]18
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]7
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]2
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]6
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]3
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]38
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0162.1:Egr1]11
NON_SYNONYMOUS_CODING9576
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION195
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS255
SPLICE_SITE_REGION21
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+SYNONYMOUS_CODING236
START_GAINED170
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED77
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_GAINED+SPLICE_SITE_REGION+CODON_INSERTION2
STOP_LOST22
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING10475
SYNONYMOUS_STOP10
TRANSCRIPT1
None0

Type Total Variants
984
MISSENSE9809
NONSENSE79
SILENT10721
None0

Type Total Variants
HIGH546
LOW10974
MODERATE10007
MODIFIER66
None0

Type Total Variants
.70785

Quality Value
Min3.01
Average125.351162958255
Max226.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
16837
103153
114609
123897
131318
142534
152389
163249
174235
181123
195038
25025
201796
21989
221707
33744
42799
53093
63083
73740
82584
93016
X812
Y15