Name: udp5436_axeq_1_hs37d5_remdup-uniqmap
Variants: 71620
Novel Variants: 5005 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 71620 41159 0/1 30461 1/1
Total Gene-associated SNVs 71620 41159 0/1 30461 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION52
CODON_CHANGE_PLUS_CODON_INSERTION39
CODON_DELETION85
CODON_INSERTION60
FRAME_SHIFT120
FRAME_SHIFT+SPLICE_SITE_REGION38
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED1
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION2
FRAME_SHIFT+STOP_LOST3
MOTIF[MA0003.1:Ap2alpha]11
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]11
MOTIF[MA0059.1:Cmyc]2
MOTIF[MA0062.1:Gabp]1
MOTIF[MA0062.2:Gabp]18
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]8
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]2
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]4
MOTIF[MA0095.1:Yy1]5
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]4
MOTIF[MA0138.2:Nrsf]3
MOTIF[MA0139.1:CTCF]34
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]10
NON_SYNONYMOUS_CODING9437
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION202
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS260
SPLICE_SITE_REGION20
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING226
START_GAINED184
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED68
STOP_GAINED+SPLICE_SITE_REGION2
STOP_GAINED+SPLICE_SITE_REGION+CODON_INSERTION1
STOP_LOST20
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING10454
SYNONYMOUS_STOP8
TRANSCRIPT1
None0

Type Total Variants
1005
MISSENSE9675
NONSENSE70
SILENT10688
None0

Type Total Variants
HIGH536
LOW10954
MODERATE9877
MODIFIER71
None0

Type Total Variants
.71620

Quality Value
Min3.01
Average124.605549846413
Max226.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
16945
103210
114764
124016
131355
142594
152297
163214
174282
181197
194851
25156
201748
21993
221686
33902
42842
52905
63091
73753
82587
93009
X1201
Y22