Name: udp2568_axeq_1_hs37d5_remdup-uniqmap
Variants: 72080
Novel Variants: 5164 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 72080 41051 0/1 31029 1/1
Total Gene-associated SNVs 72080 41051 0/1 31029 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION49
CODON_CHANGE_PLUS_CODON_INSERTION40
CODON_DELETION93
CODON_INSERTION67
FRAME_SHIFT141
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED1
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION2
FRAME_SHIFT+STOP_LOST4
MOTIF[MA0003.1:Ap2alpha]9
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]8
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]18
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]9
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]2
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]5
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]4
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]7
MOTIF[MA0139.1:CTCF]34
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]12
NON_SYNONYMOUS_CODING9712
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION193
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS249
SPLICE_SITE_REGION23
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING233
START_GAINED171
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION1
STOP_GAINED90
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION5
STOP_GAINED+SPLICE_SITE_REGION+CODON_INSERTION1
STOP_LOST22
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING10599
SYNONYMOUS_STOP12
None0

Type Total Variants
1021
MISSENSE9945
NONSENSE95
SILENT10844
None0

Type Total Variants
HIGH580
LOW11102
MODERATE10156
MODIFIER67
None0

Type Total Variants
.72080

Quality Value
Min3.01
Average124.586307019979
Max226.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
16784
103167
114736
123976
131347
142689
152354
163263
174271
181177
194888
25197
201899
211025
221753
33916
42860
53096
63167
73731
82559
93024
X1187
Y14