Mendel,MD | Dashboard

Name: chnaka
Variants: 202490
Novel Variants: 50965 (Not in latest DbSNP Build)

Type	Total Variants
Total SNVs	202490	106384 0/1	95658 1/1	448 1/2
Total Gene-associated SNVs	202490	106384 0/1	95658 1/1	448 1/2

Type	Total Variants
	46
CODON_CHANGE_PLUS_CODON_DELETION	91
CODON_CHANGE_PLUS_CODON_INSERTION	74
CODON_DELETION	33
CODON_INSERTION	50
FRAME_SHIFT	56
FRAME_SHIFT+SPLICE_SITE_REGION	12
FRAME_SHIFT+STOP_GAINED	2
GENE_FUSION_REVERESE	1
MOTIF_DELETED	1
MOTIF[MA0003.1:Ap2alpha]	13
MOTIF[MA0014.1:Pax5]	7
MOTIF[MA0016.1:RXRA]	1
MOTIF[MA0024.1:E2F1]	6
MOTIF[MA0035.2:Gata1]	1
MOTIF[MA0036.1:Gata2]	1
MOTIF[MA0047.1:FOXA2]	1
MOTIF[MA0047.2:FOXA2]	3
MOTIF[MA0058.1:Max]	12
MOTIF[MA0059.1:Cmyc]	3
MOTIF[MA0062.1:Gabp]	3
MOTIF[MA0062.2:Gabp]	14
MOTIF[MA0065.1:PPARG]	1
MOTIF[MA0079.1:SP1]	5
MOTIF[MA0079.2:SP1]	15
MOTIF[MA0080.1:PU1]	1
MOTIF[MA0080.2:PU1]	2
MOTIF[MA0093.1:USF1]	11
MOTIF[MA0095.1:Yy1]	8
MOTIF[MA0099.1:Cfos]	5
MOTIF[MA0099.2:AP1]	3
MOTIF[MA0114.1:HNF4A]	13
MOTIF[MA0115.1:RNR1H2]	1
MOTIF[MA0138.2:Nrsf]	7
MOTIF[MA0139.1:CTCF]	82
MOTIF[MA0140.1:Tal1]	3
MOTIF[MA0147.1:Cmyc]	7
MOTIF[MA0148.1:FOXA1]	3
MOTIF[MA0154.1:EBF]	7
MOTIF[MA0162.1:Egr1]	16
NON_SYNONYMOUS_CODING	4053
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION	108
NON_SYNONYMOUS_START	1
PROTEIN_PROTEIN_INTERACTION_LOCUS	4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS	154
SPLICE_SITE_REGION	17
SPLICE_SITE_REGION+CODON_DELETION	1
SPLICE_SITE_REGION+SYNONYMOUS_CODING	96
START_GAINED	121
START_LOST	7
STOP_GAINED	65
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION	1
STOP_GAINED+CODON_INSERTION	3
STOP_GAINED+SPLICE_SITE_REGION	4
STOP_GAINED+SPLICE_SITE_REGION+CODON_INSERTION	1
STOP_LOST	9
SYNONYMOUS_CODING	4456
SYNONYMOUS_STOP	2
TRANSCRIPT	1
None	0

Type	Total Variants
.	202490

Type	Total Variants
None	0