Name: vqsr_snp_indel hc recaled
Variants: 159
Novel Variants: 2 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 159 100 0/1 59 1/1
Total Gene-associated SNVs 159 100 0/1 59 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION2
CODON_CHANGE_PLUS_CODON_INSERTION1
FRAME_SHIFT+SPLICE_SITE_REGION1
NON_SYNONYMOUS_CODING71
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS6
SPLICE_SITE_REGION+SYNONYMOUS_CODING1
SYNONYMOUS_CODING56
None0

Type Total Variants
10
MISSENSE72
SILENT57
None0

Type Total Variants
HIGH7
LOW57
MODERATE75
None0

Type Total Variants
PASS155
VQSRTrancheINDEL99.90to100.003
VQSRTrancheSNP99.90to100.001

Quality Value
Min42.74
Average3222.95974842768
Max28979.77

Read Depth Value
Min2
Average153.36477987421384
Max852

Type Total Variants
None0

Chromossome Total Variants
111
22158