Name: variants selected
Variants: 267608
Novel Variants: 3952 (Not in latest DbSNP Build)

Type Total Variants
47
CODON_CHANGE_PLUS_CODON_DELETION117
CODON_CHANGE_PLUS_CODON_INSERTION90
CODON_DELETION52
CODON_INSERTION70
FRAME_SHIFT200
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
GENE_FUSION_REVERESE1
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]38
MOTIF[MA0014.1:Pax5]6
MOTIF[MA0016.1:RXRA]4
MOTIF[MA0024.1:E2F1]10
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0058.1:Max]23
MOTIF[MA0059.1:Cmyc]10
MOTIF[MA0062.1:Gabp]13
MOTIF[MA0062.2:Gabp]41
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]12
MOTIF[MA0079.2:SP1]58
MOTIF[MA0080.1:PU1]5
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]19
MOTIF[MA0095.1:Yy1]16
MOTIF[MA0099.1:Cfos]3
MOTIF[MA0099.2:AP1]4
MOTIF[MA0114.1:HNF4A]10
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]9
MOTIF[MA0139.1:CTCF]165
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]19
MOTIF[MA0148.1:FOXA1]3
MOTIF[MA0154.1:EBF]6
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]106
NON_SYNONYMOUS_CODING10794
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION231
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS243
SPLICE_SITE_REGION44
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING248
START_GAINED384
START_LOST10
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED82
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST24
STOP_LOST+CODON_DELETION1
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11452
SYNONYMOUS_STOP12
TRANSCRIPT8
None0

Type Total Variants
1914
MISSENSE11064
NONSENSE83
SILENT11712
None0

Type Total Variants
HIGH624
LOW12407
MODERATE11357
MODIFIER385
None0

Type Total Variants
PASS267608

Quality Value
Min50.01
Average1582.1515060459
Max64919.86

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
124589
1013061
1113440
1213667
136113
148481
158800
1612351
1713477
184810
1915382
220551
206329
215817
225824
314818
412723
511107
614446
714133
88932
911488
M47
X4425
Y2797