Name: 62421900_s18-180124_k00541_0065_bhnjl7bbxx-normal-illuwesagi-76f236ce-freb filt pass
Variants: 87122
Novel Variants: 11054 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 62 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 57 |
| CODON_DELETION | 85 |
| CODON_INSERTION | 81 |
| FRAME_SHIFT | 166 |
| FRAME_SHIFT+NON_SYNONYMOUS_CODING | 11 |
| FRAME_SHIFT+NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 2 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 44 |
| FRAME_SHIFT+SPLICE_SITE_REGION+SYNONYMOUS_CODING | 1 |
| FRAME_SHIFT+STOP_GAINED | 4 |
| FRAME_SHIFT+STOP_LOST | 4 |
| FRAME_SHIFT+SYNONYMOUS_CODING | 1 |
| GENE_FUSION_REVERESE | 1 |
| MOTIF_DELETED | 1 |
| MOTIF[MA0003.1:Ap2alpha] | 18 |
| MOTIF[MA0014.1:Pax5] | 3 |
| MOTIF[MA0024.1:E2F1] | 2 |
| MOTIF[MA0035.2:Gata1] | 1 |
| MOTIF[MA0036.1:Gata2] | 1 |
| MOTIF[MA0058.1:Max] | 8 |
| MOTIF[MA0059.1:Cmyc] | 1 |
| MOTIF[MA0062.1:Gabp] | 4 |
| MOTIF[MA0062.2:Gabp] | 18 |
| MOTIF[MA0065.2:PPARG] | 1 |
| MOTIF[MA0079.1:SP1] | 1 |
| MOTIF[MA0079.2:SP1] | 12 |
| MOTIF[MA0080.1:PU1] | 1 |
| MOTIF[MA0080.2:PU1] | 2 |
| MOTIF[MA0093.1:USF1] | 2 |
| MOTIF[MA0095.1:Yy1] | 6 |
| MOTIF[MA0099.1:Cfos] | 2 |
| MOTIF[MA0099.2:AP1] | 1 |
| MOTIF[MA0114.1:HNF4A] | 3 |
| MOTIF[MA0138.2:Nrsf] | 5 |
| MOTIF[MA0139.1:CTCF] | 61 |
| MOTIF[MA0147.1:Cmyc] | 2 |
| MOTIF[MA0154.1:EBF] | 1 |
| MOTIF[MA0162.1:Egr1] | 9 |
| NON_SYNONYMOUS_CODING | 11733 |
| NON_SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_DELETION | 2 |
| NON_SYNONYMOUS_CODING+CODON_DELETION | 2 |
| NON_SYNONYMOUS_CODING+CODON_INSERTION | 1 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 236 |
| NON_SYNONYMOUS_START | 2 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 5 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 248 |
| SPLICE_SITE_REGION | 35 |
| SPLICE_SITE_REGION+CODON_DELETION | 2 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 251 |
| START_GAINED | 193 |
| START_LOST | 12 |
| START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| STOP_GAINED | 88 |
| STOP_GAINED+SPLICE_SITE_REGION | 3 |
| STOP_LOST | 26 |
| STOP_LOST+CODON_DELETION | 1 |
| STOP_LOST+SPLICE_SITE_REGION | 3 |
| SYNONYMOUS_CODING | 11808 |
| SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_DELETION | 2 |
| SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| SYNONYMOUS_CODING+CODON_DELETION | 1 |
| SYNONYMOUS_STOP | 13 |
| TRANSCRIPT | 4 |
| None | 0 |
| Type | Total Variants |
|---|---|
| PASS | 87122 |
| Quality | Value |
|---|---|
| Min | 10.003 |
| Average | 1254.52219200547 |
| Max | 48958.6 |
| Read Depth | Value |
|---|---|
| Min | 2 |
| Average | 84.16952090172401 |
| Max | 3008 |
| Type | Total Variants |
|---|---|
| None | 0 |