Name: 62421900_s18-180124_k00541_0065_bhnjl7bbxx-normal-illuwesagi-76f236ce-freb filt pass
Variants: 87122
Novel Variants: 11054 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 87122 54593 0/1 1 0/2 31985 1/1 543 1/2
Total Gene-associated SNVs 87122 54593 0/1 1 0/2 31985 1/1 543 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION62
CODON_CHANGE_PLUS_CODON_INSERTION57
CODON_DELETION85
CODON_INSERTION81
FRAME_SHIFT166
FRAME_SHIFT+NON_SYNONYMOUS_CODING11
FRAME_SHIFT+NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION2
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+SPLICE_SITE_REGION+SYNONYMOUS_CODING1
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST4
FRAME_SHIFT+SYNONYMOUS_CODING1
GENE_FUSION_REVERESE1
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]18
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]8
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.1:Gabp]4
MOTIF[MA0062.2:Gabp]18
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]12
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]2
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]6
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]3
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]61
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]9
NON_SYNONYMOUS_CODING11733
NON_SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_DELETION2
NON_SYNONYMOUS_CODING+CODON_DELETION2
NON_SYNONYMOUS_CODING+CODON_INSERTION1
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION236
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS248
SPLICE_SITE_REGION35
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+SYNONYMOUS_CODING251
START_GAINED193
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED88
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST26
STOP_LOST+CODON_DELETION1
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11808
SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_DELETION2
SYNONYMOUS_CODING+CODON_CHANGE_PLUS_CODON_INSERTION1
SYNONYMOUS_CODING+CODON_DELETION1
SYNONYMOUS_STOP13
TRANSCRIPT4
None0

Type Total Variants
1717
MISSENSE11535
NONSENSE84
SILENT12022
None0

Type Total Variants
HIGH621
LOW12371
MODERATE12265
MODIFIER101
None0

Type Total Variants
PASS87122

Quality Value
Min10.003
Average1254.52219200547
Max48958.6

Read Depth Value
Min2
Average84.16952090172401
Max3008

Type Total Variants
None0

Chromossome Total Variants
18383
103676
115336
124477
131506
142996
153303
164030
175097
181589
196029
25944
202082
211216
222603
34625
43216
53665
65050
74518
82951
93617
X1148
Y65