Name: moss final
Variants: 106870
Novel Variants: 1382 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 106870 64929 0/1 41697 1/1 244 1/2
Total Gene-associated SNVs 106870 64929 0/1 41697 1/1 244 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION139
CODON_CHANGE_PLUS_CODON_INSERTION100
CODON_DELETION52
CODON_INSERTION84
FRAME_SHIFT266
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST5
FRAME_SHIFT+STOP_GAINED8
FRAME_SHIFT+STOP_LOST5
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED3
MOTIF[MA0003.1:Ap2alpha]23
MOTIF[MA0014.1:Pax5]1
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]14
MOTIF[MA0059.1:Cmyc]7
MOTIF[MA0062.1:Gabp]3
MOTIF[MA0062.2:Gabp]22
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]5
MOTIF[MA0079.2:SP1]15
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]3
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]7
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]2
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]5
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]79
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]5
MOTIF[MA0154.1:EBF]6
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]27
NON_SYNONYMOUS_CODING11506
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION233
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS6
PROTEIN_STRUCTURAL_INTERACTION_LOCUS239
SPLICE_SITE_REGION32
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING263
START_GAINED248
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED113
STOP_LOST28
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING11728
SYNONYMOUS_STOP11
TRANSCRIPT3
None0

Type Total Variants
1483
MISSENSE11782
NONSENSE113
SILENT12002
None0

Type Total Variants
HIGH730
LOW12401
MODERATE12116
MODIFIER133
None0

Type Total Variants
MG_INDEL_Filter137
MG_SNP_Filter3419
PASS103314

Quality Value
Min30.04
Average820.532573126009
Max41185.77

Read Depth Value
Min0
Average44.18238046224385
Max1417

Type Total Variants
None0

Chromossome Total Variants
110504
104832
116667
125954
131996
143580
153895
164985
176117
181765
197001
27576
202742
211662
222692
35696
44146
54577
64672
76089
83806
94576
X1270
Y70