Name: filtered6
Variants: 174604
Novel Variants: 25 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 174604 50308 0/1 56110 1/0 68186 1/1
Total Gene-associated SNVs 174604 50308 0/1 56110 1/0 68186 1/1

Type Total Variants
FRAME_SHIFT6
FRAME_SHIFT+SPLICE_SITE_REGION1
MOTIF[MA0003.1:Ap2alpha]2
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]3
MOTIF[MA0047.1:FOXA2]2
MOTIF[MA0047.2:FOXA2]6
MOTIF[MA0058.1:Max]9
MOTIF[MA0059.1:Cmyc]2
MOTIF[MA0062.2:Gabp]2
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0079.2:SP1]5
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]1
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]9
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0099.1:Cfos]8
MOTIF[MA0099.2:AP1]8
MOTIF[MA0105.1:NFKB]2
MOTIF[MA0114.1:HNF4A]12
MOTIF[MA0138.2:Nrsf]9
MOTIF[MA0139.1:CTCF]50
MOTIF[MA0140.1:Tal1]4
MOTIF[MA0147.1:Cmyc]4
MOTIF[MA0148.1:FOXA1]5
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]6
NON_SYNONYMOUS_CODING4723
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION124
NON_SYNONYMOUS_START3
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS155
SPLICE_SITE_REGION16
SPLICE_SITE_REGION+SYNONYMOUS_CODING58
START_GAINED52
START_LOST11
STOP_GAINED223
STOP_GAINED+SPLICE_SITE_REGION6
STOP_LOST5
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING1264
SYNONYMOUS_STOP1
None0

Type Total Variants
398
MISSENSE4868
NONSENSE229
SILENT1323
None0

Type Total Variants
HIGH412
LOW1444
MODERATE4847
MODIFIER115
None0

Type Total Variants
.158759
DUPE136
DUPE;ZCALL_DIFF22
ZCALL_DIFF15687

Quality Value
Min0.0
Average0.0
Max0.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
113318
108350
118428
128301
136111
145455
155493
165700
175166
185038
193978
213924
204141
212570
222650
311420
410897
510014
612579
79144
88940
97536
MT6
X5263
Y182