Name: filtered5
Variants: 173652
Novel Variants: 27 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 173652 50110 0/1 55376 1/0 68166 1/1
Total Gene-associated SNVs 173652 50110 0/1 55376 1/0 68166 1/1

Type Total Variants
FRAME_SHIFT6
FRAME_SHIFT+SPLICE_SITE_REGION1
MOTIF[MA0003.1:Ap2alpha]2
MOTIF[MA0005.1:MEF2C]1
MOTIF[MA0014.1:Pax5]1
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]5
MOTIF[MA0047.1:FOXA2]4
MOTIF[MA0047.2:FOXA2]6
MOTIF[MA0058.1:Max]10
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]2
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]6
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]4
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]11
MOTIF[MA0095.1:Yy1]2
MOTIF[MA0099.1:Cfos]7
MOTIF[MA0099.2:AP1]9
MOTIF[MA0105.1:NFKB]2
MOTIF[MA0114.1:HNF4A]3
MOTIF[MA0138.2:Nrsf]11
MOTIF[MA0139.1:CTCF]51
MOTIF[MA0140.1:Tal1]4
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0148.1:FOXA1]3
MOTIF[MA0154.1:EBF]3
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]7
NON_SYNONYMOUS_CODING4771
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION121
NON_SYNONYMOUS_START3
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS147
SPLICE_SITE_REGION12
SPLICE_SITE_REGION+SYNONYMOUS_CODING62
START_GAINED52
START_LOST12
STOP_GAINED221
STOP_GAINED+SPLICE_SITE_REGION7
STOP_LOST5
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING1251
SYNONYMOUS_STOP1
None0

Type Total Variants
393
MISSENSE4914
NONSENSE228
SILENT1314
None0

Type Total Variants
HIGH404
LOW1441
MODERATE4892
MODIFIER112
None0

Type Total Variants
.157846
DUPE132
DUPE;ZCALL_DIFF22
ZCALL_DIFF15652

Quality Value
Min0.0
Average0.0
Max0.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
113425
108427
118547
128120
136406
145650
155491
165723
175157
185096
193891
213901
204055
212632
222546
311481
410949
59898
611410
79305
88655
97627
MT6
X5072
Y182