Name: filtered2
Variants: 176098
Novel Variants: 16 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 176098 52001 0/1 57651 1/0 66446 1/1
Total Gene-associated SNVs 176098 52001 0/1 57651 1/0 66446 1/1

Type Total Variants
FRAME_SHIFT7
FRAME_SHIFT+SPLICE_SITE_REGION1
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0005.1:MEF2C]1
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]4
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]7
MOTIF[MA0058.1:Max]10
MOTIF[MA0059.1:Cmyc]3
MOTIF[MA0062.1:Gabp]1
MOTIF[MA0062.2:Gabp]2
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]5
MOTIF[MA0080.2:PU1]4
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]10
MOTIF[MA0095.1:Yy1]2
MOTIF[MA0099.1:Cfos]5
MOTIF[MA0099.2:AP1]8
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]12
MOTIF[MA0138.2:Nrsf]7
MOTIF[MA0139.1:CTCF]55
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]4
MOTIF[MA0148.1:FOXA1]4
MOTIF[MA0154.1:EBF]3
MOTIF[MA0162.1:Egr1]4
NON_SYNONYMOUS_CODING4772
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION133
NON_SYNONYMOUS_START3
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS151
SPLICE_SITE_REGION16
SPLICE_SITE_REGION+SYNONYMOUS_CODING59
START_GAINED52
START_LOST8
STOP_GAINED224
STOP_GAINED+SPLICE_SITE_REGION5
STOP_LOST5
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING1288
SYNONYMOUS_STOP1
None0

Type Total Variants
399
MISSENSE4922
NONSENSE229
SILENT1348
None0

Type Total Variants
HIGH406
LOW1474
MODERATE4905
MODIFIER113
None0

Type Total Variants
.160085
DUPE149
DUPE;ZCALL_DIFF25
ZCALL_DIFF15839

Quality Value
Min0.0
Average0.0
Max0.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
113379
108415
118810
128180
136158
145659
155572
165609
175162
185036
193954
213959
204192
212591
222523
311554
411025
59786
611950
79309
88569
97509
MT5
X6952
Y240