Name: 54871510242650_annotated-2
Variants: 44457
Novel Variants: 259 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 44457 27448 0/1 16962 1/1 47 1/2
Total Gene-associated SNVs 44457 27448 0/1 16962 1/1 47 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION67
CODON_CHANGE_PLUS_CODON_INSERTION55
CODON_DELETION32
CODON_INSERTION44
FRAME_SHIFT221
FRAME_SHIFT+SPLICE_SITE_REGION38
FRAME_SHIFT+START_LOST2
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST2
GENE_FUSION_REVERESE1
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]5
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]4
MOTIF[MA0062.2:Gabp]5
MOTIF[MA0079.2:SP1]1
MOTIF[MA0080.1:PU1]2
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0099.2:AP1]1
MOTIF[MA0138.2:Nrsf]2
MOTIF[MA0139.1:CTCF]24
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0162.1:Egr1]3
NON_SYNONYMOUS_CODING9314
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION170
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS225
SPLICE_SITE_REGION17
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING185
SPLICE_SITE_REGION+SYNONYMOUS_STOP1
START_GAINED86
START_LOST10
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED72
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST15
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING9914
SYNONYMOUS_STOP7
None0

Type Total Variants
857
MISSENSE9512
NONSENSE74
SILENT10107
None0

Type Total Variants
HIGH598
LOW10238
MODERATE9684
MODIFIER30
None0

Type Total Variants
Indel_QC59
PASS43113
SNP_QC1285

Quality Value
Min30.27
Average1660.81504892338
Max26033.77

Read Depth Value
Min1
Average86.85361135479228
Max1142

Type Total Variants
None0

Chromossome Total Variants
14271
101815
113381
122321
13794
141708
151469
162036
172636
18711
193078
22874
201138
21688
221256
32193
41723
51954
62010
72551
81619
91758
X460
Y13