Name: mm190623opd
Variants: 155816
Novel Variants: 3711 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 155816 97499 0/1 57847 1/1 470 1/2
Total Gene-associated SNVs 155816 97499 0/1 57847 1/1 470 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION119
CODON_CHANGE_PLUS_CODON_INSERTION76
CODON_DELETION57
CODON_INSERTION72
FRAME_SHIFT186
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED3
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]28
MOTIF[MA0014.1:Pax5]8
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]6
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]17
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]11
MOTIF[MA0062.2:Gabp]32
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]10
MOTIF[MA0079.2:SP1]21
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]10
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]6
MOTIF[MA0138.1:Nrsf]2
MOTIF[MA0138.2:Nrsf]6
MOTIF[MA0139.1:CTCF]104
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]17
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]47
NON_SYNONYMOUS_CODING13458
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION282
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS266
SPLICE_SITE_REGION36
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING274
START_GAINED382
START_LOST15
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED125
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST24
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING13191
SYNONYMOUS_STOP14
TRANSCRIPT1
None0

Type Total Variants
1614
MISSENSE13783
NONSENSE128
SILENT13479
None0

Type Total Variants
HIGH678
LOW14055
MODERATE14066
MODIFIER205
None0

Type Total Variants
.147250
LowQual8566

Quality Value
Min10.17
Average1185.11520832365
Max65449.29

Read Depth Value
Min1
Average87.9883131385737
Max9900

Type Total Variants
None0

Chromossome Total Variants
114991
106725
118931
128327
132689
145155
155743
167613
178923
182699
1910896
210427
204040
212419
224459
38707
46387
56122
68677
78222
85136
96604
X1669
Y255