Name: wt108005 snp
Variants: 9999
Novel Variants: 63 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 9999 5625 0/1 4374 1/1
Total Gene-associated SNVs 9999 5625 0/1 4374 1/1

Type Total Variants
MOTIF[MA0003.1:Ap2alpha]1
MOTIF[MA0014.1:Pax5]2
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0058.1:Max]2
MOTIF[MA0062.2:Gabp]2
MOTIF[MA0093.1:USF1]1
MOTIF[MA0139.1:CTCF]3
NON_SYNONYMOUS_CODING2152
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION40
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS50
SPLICE_SITE_REGION5
SPLICE_SITE_REGION+SYNONYMOUS_CODING44
START_GAINED26
START_LOST2
STOP_GAINED26
STOP_LOST2
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING2215
SYNONYMOUS_STOP3
None0

Type Total Variants
95
MISSENSE2198
NONSENSE26
SILENT2262
None0

Type Total Variants
HIGH82
LOW2299
MODERATE2192
MODIFIER8
None0

Type Total Variants
PASS9999

Quality Value
Min19.6
Average1735.48505350514
Max15700.6

Read Depth Value
Min4
Average93.12551255125513
Max1094

Type Total Variants
None0

Chromossome Total Variants
15061
23234
31704