Name: rcl1126
Variants: 30314
Novel Variants: 508 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 30314 17965 0/1 12349 1/1
Total Gene-associated SNVs 30314 17965 0/1 12349 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION77
CODON_CHANGE_PLUS_CODON_INSERTION55
CODON_DELETION31
CODON_INSERTION31
FRAME_SHIFT125
FRAME_SHIFT+SPLICE_SITE_REGION35
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED2
FRAME_SHIFT+STOP_LOST1
MOTIF[MA0003.1:Ap2alpha]3
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.1:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]3
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]2
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]3
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0114.1:HNF4A]3
MOTIF[MA0139.1:CTCF]6
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]4
NON_SYNONYMOUS_CODING10812
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION204
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS234
SPLICE_SITE_REGION10
SPLICE_SITE_REGION+SYNONYMOUS_CODING224
START_GAINED38
START_LOST10
STOP_GAINED84
STOP_LOST20
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11263
SYNONYMOUS_STOP7
None0

Type Total Variants
690
MISSENSE11050
NONSENSE84
SILENT11494
None0

Type Total Variants
HIGH522
LOW11567
MODERATE11210
MODIFIER19
None0

Type Total Variants
PASS30314

Quality Value
Min0.0
Average0.0
Max0.0

Read Depth Value
Min10
Average49.7918783400409
Max287

Type Total Variants
None0

Chromossome Total Variants
13024
101182
112178
121518
13494
14923
151057
161386
171699
18440
192326
21991
20624
21406
22712
31812
41186
51240
61795
71651
8949
91208
X485
Y28