Name: mm160117hb v200
Variants: 118521
Novel Variants: 977 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 118521 68466 0/1 49816 1/1 239 1/2
Total Gene-associated SNVs 118521 68466 0/1 49816 1/1 239 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION134
CODON_CHANGE_PLUS_CODON_INSERTION97
CODON_DELETION55
CODON_INSERTION66
FRAME_SHIFT268
FRAME_SHIFT+SPLICE_SITE_REGION43
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST2
GENE_FUSION1
GENE_FUSION_REVERESE3
MOTIF_DELETED7
MOTIF[MA0003.1:Ap2alpha]30
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]6
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]16
MOTIF[MA0059.1:Cmyc]3
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]31
MOTIF[MA0079.1:SP1]4
MOTIF[MA0079.2:SP1]17
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]3
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]9
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]7
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]4
MOTIF[MA0139.1:CTCF]71
MOTIF[MA0147.1:Cmyc]6
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]29
NON_SYNONYMOUS_CODING10994
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION246
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS242
SPLICE_SITE_REGION35
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING235
START_GAINED269
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED104
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST22
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING11485
SYNONYMOUS_STOP11
TRANSCRIPT2
None0

Type Total Variants
1505
MISSENSE11278
NONSENSE105
SILENT11731
None0

Type Total Variants
HIGH717
LOW12165
MODERATE11595
MODIFIER142
None0

Type Total Variants
.118521

Quality Value
Min30.19
Average775.317970570568
Max60427.77

Read Depth Value
Min0
Average38.02199610195662
Max2882

Type Total Variants
None0

Chromossome Total Variants
111537
105244
117254
126364
132412
144315
153914
165234
176314
181945
197367
28330
203019
211857
222766
36480
44829
55176
67034
76424
84090
94745
X1829
Y42